alphabet                package:VLMC                R Documentation

_T_h_e _A_l_p_h_a_b_e_t _i_n _U_s_e

_D_e_s_c_r_i_p_t_i_o_n:

     Return the alphabet in use, as a vector of "characters".

_U_s_a_g_e:

     alphabet(x, ...)
     ## S3 method for class 'vlmc':
     alphabet(x, ...)

_A_r_g_u_m_e_n_t_s:

       x: any R object, currently only available for 'vlmc' ones.

     ...: potential further arguments passed to and from methods.

_V_a_l_u_e:

     a 'character' vector, say 'r', with length equal to the alphabet
     size.  Currently, typically all 'r[i]' are strings of just one
     character.

_S_e_e _A_l_s_o:

     'alpha2int' for conversion to and from integer codings.

_E_x_a_m_p_l_e_s:

     data(bnrf1)
     vb <- vlmc(bnrf1EB, cutoff = 5)
     alphabet(vb) # |--> "a" "c" "g" "t"

