* checking for working latex ... OK * using log directory 'd:/Rcompile/CRANpkg/check/1.8/SoPhy.Rcheck' * checking for file 'SoPhy/DESCRIPTION' ... OK * checking if this is a source package ... OK ---------- Making package SoPhy ------------ adding build stamp to DESCRIPTION making DLL ... g77 -O2 -Wall -c INPUT2.f -o INPUT2.o INPUT2.f: In subroutine `basinf': INPUT2.f:46: warning: unused variable `iu' INPUT2.f:43: warning: unused variable `munit' INPUT2.f:43: warning: unused variable `tunit' INPUT2.f:43: warning: unused variable `lunit' INPUT2.f:42: warning: unused variable `hed' INPUT2.f: In subroutine `geomin': INPUT2.f:544: warning: unused variable `text1' g77 -O2 -Wall -c MATERIAL2.f -o MATERIAL2.o MATERIAL2.f: In function `fk': MATERIAL2.f:34: warning: `fk' might be used uninitialized in this function g77 -O2 -Wall -c ORTHOFEM.f -o ORTHOFEM.o ORTHOFEM.f: In subroutine `orthomin': ORTHOFEM.f:515: warning: `dot' might be used uninitialized in this function ORTHOFEM.f:516: warning: `resv' might be used uninitialized in this function ORTHOFEM.f:569: warning: `rqnorm' might be used uninitialized in this function g77 -O2 -Wall -c OUTPUT2.f -o OUTPUT2.o OUTPUT2.f: In subroutine `subreg': OUTPUT2.f:220: warning: `volume' might be used uninitialized in this function OUTPUT2.f:221: warning: `change' might be used uninitialized in this function OUTPUT2.f:222: warning: `htot' might be used uninitialized in this function OUTPUT2.f:223: warning: `deltw' might be used uninitialized in this function OUTPUT2.f:226: warning: `ctot' might be used uninitialized in this function OUTPUT2.f:227: warning: `convol' might be used uninitialized in this function OUTPUT2.f:228: warning: `deltc' might be used uninitialized in this function g77 -O2 -Wall -c PCK.f -o PCK.o PCK.f: In subroutine `xpack': PCK.f:69: warning: unused variable `ldebug' PCK.f: In subroutine `xunpck': PCK.f:421: warning: unused variable `ldebug' g77 -O2 -Wall -c SINK2.f -o SINK2.o SINK2.f: In function `falfa': SINK2.f:56: warning: `p2' might be used uninitialized in this function g77 -O2 -Wall -c SOLUTE2.f -o SOLUTE2.o SOLUTE2.f: In subroutine `solute': SOLUTE2.f:219: warning: `ace' might be used uninitialized in this function SOLUTE2.f: In subroutine `c_bound': SOLUTE2.f:344: warning: `cbnd' might be used uninitialized in this function g77 -O2 -Wall -c SWMS_2D.f -o SWMS_2D.o SWMS_2D.f: In subroutine `swms2d': SWMS_2D.f:338: warning: `iiprnt' might be used uninitialized in this function g77 -O2 -Wall -c TIME2.f -o TIME2.o TIME2.f: In subroutine `setatm': TIME2.f:121: warning: `rgwlold' might be used uninitialized in this function g77 -O2 -Wall -c WATFLOW2.f -o WATFLOW2.o WATFLOW2.f: In subroutine `reset': WATFLOW2.f:246: warning: `arear' might be used uninitialized in this function g77 -O2 -Wall -c analytic.f -o analytic.o ar cr SoPhy.a *.o ranlib SoPhy.a windres --include-dir d:/Rcompile/recent/R-1.8.1/src/include -i SoPhy_res.rc -o SoPhy_res.o gcc --shared -s -o SoPhy.dll SoPhy.def SoPhy.a SoPhy_res.o -Ld:/Rcompile/recent/R-1.8.1/src/gnuwin32 -lg2c -lR ... DLL made installing DLL installing R files installing inst files installing man source files installing indices installing help >>> Building/Updating help pages for package 'SoPhy' Formats: text html latex example CDE text html latex example read.swms2d.table text html latex example swms2d text html latex example >>> Building/Updating help pages for package 'SoPhy' Formats: chm CDE chm read.swms2d.table chm swms2d chm Microsoft HTML Help Compiler 4.74.8702 Compiling d:\Rcompile\CRANpkg\check\1.8\SoPhy\chm\SoPhy.chm Compile time: 0 minutes, 1 second 4 Topics 10 Local links 4 Internet links 1 Graphic Created d:\Rcompile\CRANpkg\check\1.8\SoPhy\chm\SoPhy.chm, 38,273 bytes Compression decreased file by 3,586 bytes. adding MD5 sums installing R.css in d:/Rcompile/CRANpkg/check/1.8/SoPhy.Rcheck * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking package dependencies ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for syntax errors ... OK * checking R files for library.dynam ... OK * checking S3 generic/method consistency ... OK * checking for replacement functions with final arg not named 'value' ... OK * checking Rd files ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking for CRLF line endings in C sources/headers ... OK * creating SoPhy-Ex.R ... OK * checking examples ... OK * checking tests ... make[1]: Entering directory `/cygdrive/d/Rcompile/CRANpkg/check/1.8/SoPhy.Rcheck/tests' Running 'test.R' make[1]: Leaving directory `/cygdrive/d/Rcompile/CRANpkg/check/1.8/SoPhy.Rcheck/tests' OK * creating SoPhy-manual.tex ... OK * checking SoPhy-manual.tex ... OK