* checking for working latex ... OK * using log directory 'd:/Rcompile/CRANpkg/check/1.8/exactRankTests.Rcheck' * checking for file 'exactRankTests/DESCRIPTION' ... OK * checking if this is a source package ... OK ---------- Making package exactRankTests ------------ adding build stamp to DESCRIPTION installing NAMESPACE file making DLL ... making ansari.d from ansari.c making irank.d from irank.c making permdist.d from permdist.c making spermdist.d from spermdist.c gcc -Id:/Rcompile/recent/R-1.8.1/src/include -Wall -O2 -c ansari.c -o ansari.o gcc -Id:/Rcompile/recent/R-1.8.1/src/include -Wall -O2 -c irank.c -o irank.o gcc -Id:/Rcompile/recent/R-1.8.1/src/include -Wall -O2 -c permdist.c -o permdist.o gcc -Id:/Rcompile/recent/R-1.8.1/src/include -Wall -O2 -c spermdist.c -o spermdist.o ar cr exactRankTests.a *.o ranlib exactRankTests.a windres --include-dir d:/Rcompile/recent/R-1.8.1/src/include -i exactRankTests_res.rc -o exactRankTests_res.o gcc --shared -s -o exactRankTests.dll exactRankTests.def exactRankTests.a exactRankTests_res.o -Ld:/Rcompile/recent/R-1.8.1/src/gnuwin32 -lg2c -lR ... DLL made installing DLL installing R files installing data files installing man source files installing indices not zipping data installing help >>> Building/Updating help pages for package 'exactRankTests' Formats: text html latex example ASAT text html latex example ansari.exact text html latex example missing link(s): fligner.test mood.test var.test bartlett.test bloodp text html latex example cscores text html latex example dperm text html latex example ears text html latex example glioma text html latex example globulin text html latex example irank text html latex example lungcancer text html latex example neuropathy text html latex example ocarcinoma text html latex example perm.test text html latex example rotarod text html latex example sal text html latex example wilcox.exact text html latex example >>> Building/Updating help pages for package 'exactRankTests' Formats: chm ASAT chm ansari.exact chm bloodp chm cscores chm dperm chm ears chm glioma chm globulin chm irank chm lungcancer chm neuropathy chm ocarcinoma chm perm.test chm rotarod chm sal chm wilcox.exact chm Microsoft HTML Help Compiler 4.74.8702 Compiling d:\Rcompile\CRANpkg\check\1.8\exactRankTests\chm\exactRankTests.chm Compile time: 0 minutes, 2 seconds 17 Topics 40 Local links 2 Internet links 1 Graphic Created d:\Rcompile\CRANpkg\check\1.8\exactRankTests\chm\exactRankTests.chm, 54,407 bytes Compression decreased file by 25,332 bytes. adding MD5 sums installing R.css in d:/Rcompile/CRANpkg/check/1.8/exactRankTests.Rcheck * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking package dependencies ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for syntax errors ... OK * checking R files for library.dynam ... OK * checking S3 generic/method consistency ... OK * checking for replacement functions with final arg not named 'value' ... OK * checking Rd files ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking for CRLF line endings in C sources/headers ... OK * creating exactRankTests-Ex.R ... OK * checking examples ... OK * checking tests ... make[1]: Entering directory `/cygdrive/d/Rcompile/CRANpkg/check/1.8/exactRankTests.Rcheck/tests' Running 'bugfix-tests.R' Comparing 'bugfix-tests.Rout' to 'bugfix-tests.Rout.save' ...OK Running 'dtest.R' Comparing 'dtest.Rout' to 'dtest.Rout.save' ...102c102 < Max difference: 9.65894e-15 --- > Max difference: 7.771561e-16 OK Running 'exactRankTests-Ex.R' Comparing 'exactRankTests-Ex.Rout' to 'exactRankTests-Ex.Rout.save' ...197c197 < [1] 0.0376 --- > [1] 0.0467 201c201 < [1] 0.0705 --- > [1] 0.0791 325c325 < [1] 3.872587 --- > [1] 3.869096 342c342 < [1] 0.01066271 --- > [1] 0.01025136 439a440,441 > Warning message: > cannot hold tol, tolerance: 0.010001 in: findfact(scores - min(scores) + 1, m, tol) 561,562d562 < Warning message: < cannot hold tol, tolerance: 0.01 in: findfact(scores - min(scores) + 1, m, tol) OK Running 'exactRankTests-ExOLD.R' Comparing 'exactRankTests-ExOLD.Rout' to 'exactRankTests-ExOLD.Rout.save' ...122c122 < [1] 3.872587 --- > [1] 3.869096 128c128 < [1] 0.5188357 --- > [1] 0.5184243 143c143 < [1] 0.01066271 --- > [1] 0.01025136 OK Running 'reg-tests.R' Running 'stest.R' Comparing 'stest.Rout' to 'stest.Rout.save' ...OK make[1]: Leaving directory `/cygdrive/d/Rcompile/CRANpkg/check/1.8/exactRankTests.Rcheck/tests' OK * creating exactRankTests-manual.tex ... OK * checking exactRankTests-manual.tex ... OK