* checking for working latex ... OK * using log directory 'd:/Rcompile/CRANpkg/check/1.8/mscalib.Rcheck' * checking for file 'mscalib/DESCRIPTION' ... OK * checking if this is a source package ... OK ---------- Making package mscalib ------------ adding build stamp to DESCRIPTION making DLL ... making mscalibD.d from mscalibD.c gcc -Id:/Rcompile/recent/R-1.8.1/src/include -Wall -O2 -c mscalibD.c -o mscalibD.o ar cr mscalib.a *.o ranlib mscalib.a windres --include-dir d:/Rcompile/recent/R-1.8.1/src/include -i mscalib_res.rc -o mscalib_res.o gcc --shared -s -o mscalib.dll mscalib.def mscalib.a mscalib_res.o -Ld:/Rcompile/recent/R-1.8.1/src/gnuwin32 -lg2c -lR ... DLL made installing DLL installing R files installing data files installing man source files installing indices not zipping data installing help >>> Building/Updating help pages for package 'mscalib' Formats: text html latex example [.caliblist text html latex example [.massvector text html latex example [.massvectorlist text html latex example [Assing.massvectorlist text html latex example [[Assing.caliblist text html latex example [[Assing.massvectorlist text html latex example applycalib.calibintlist text html latex example applycalib.calibintstat text html latex example applycalib.calibrelist text html latex example applycalib.calibrestat text html latex example applycalib.calibspline text html latex example applyextcalib.massvector text html latex example applyextcalib.massvectorlist text html latex example applyintcalib.massvector text html latex example applyintcalib.massvectorlist text html latex example applyrecalib.massvector text html latex example applyrecalib.massvectorlist text html latex example as.data.frame.mlist text html latex example as.list.massvectorlist text html latex example as.lm.calibintstat text html latex as.matrix.massvector text html latex example as.matrix.mlist text html latex example as.vector.calibintstat text html latex example as.vector.calibrestat text html latex example as.vector.massvector text html latex example c.massvector text html latex example c.massvectorlist text html latex example cal text html latex calibexternal.massvector text html latex example calibexternal.massvectorlist text html latex example calibintstat text html latex example caliblist text html latex example calibrestat text html latex example calibspline text html latex compare.massvector text html latex example correctinternal.massvector text html latex example correctinternal.massvectorlist text html latex example diffFilter.massvector text html latex example diffFilter.massvectorlist text html latex example experiment.mlist text html latex example gamasses.massvector text html latex example gamasses.massvectorlist text html latex example getPPGmasses text html latex example getaccC text html latex example getdiff.massvector text html latex getdiff.massvectorlist text html latex example getextcalib.massvector text html latex example getextcalib.massvectorlist text html latex getglobalcalib.massvectorlist text html latex example getintcalib.massvector text html latex getintcalib.massvectorlist text html latex example getrecalib.massvector text html latex example getrecalib.massvectorlist text html latex example globalcalib.massvectorlist text html latex example hist.calibintlist text html latex example hist.calibrelist text html latex example hist.calibstat text html latex hist.massvector text html latex example hist.massvectorlist text html latex example hist.mylistobj text html latex histLengths text html latex image.massvector text html latex example image.mlist text html latex example image.mylistobj text html latex info.mylistobj text html latex example info.myobj text html latex example length.massvector text html latex example mass.massvector text html latex example massvector text html latex example massvectorlist text html latex example max.massvector text html latex mget.massvector text html latex example mget.mlist text html latex example mget.mylistobj text html latex example mget.myobj text html latex example min.massvector text html latex mscalib-internal text html latex mv1 text html latex mvFilter.massvector text html latex example mvFilter.massvectorlist text html latex example mvl text html latex mvll text html latex peaks.massvector text html latex example plot.calibintlist text html latex example plot.calibintstat text html latex example plot.caliblist text html latex plot.calibrelist text html latex example plot.calibspline text html latex example plot.calibstat text html latex plot.massvector text html latex example plot.massvectorlist text html latex example plot.mylistobj text html latex ppg text html latex print.calibintstat text html latex example print.caliblist text html latex example print.calibrestat text html latex example print.calibspline text html latex example print.calibstat text html latex print.massvector text html latex example print.massvectorlist text html latex example project.massvectorlist text html latex example readF.massvector text html latex example readF.massvectorlist text html latex example recalibrate.massvector text html latex example recalibrate.massvectorlist text html latex example residuals.massvector text html latex example setParmsAssing.mylistobj text html latex example setParmsAssing.myobj text html latex example subset.mlist text html latex example summary.calibintstat text html latex example summary.calibspline text html latex example summary.calibstat text html latex example summary.massvector text html latex summary.mlist text html latex example unlist.massvectorlist text html latex example writeF.massvector text html latex example writeF.massvectorlist text html latex wsFilter.massvector text html latex example wsFilter.massvectorlist text html latex example wsdist.massvector text html latex example wsiFilter.massvector text html latex example >>> Building/Updating help pages for package 'mscalib' Formats: chm [.caliblist chm [.massvector chm [.massvectorlist chm [Assing.massvectorlist chm [[Assing.caliblist chm [[Assing.massvectorlist chm applycalib.calibintlist chm applycalib.calibintstat chm applycalib.calibrelist chm applycalib.calibrestat chm applycalib.calibspline chm applyextcalib.massvector chm applyextcalib.massvectorlist chm applyintcalib.massvector chm applyintcalib.massvectorlist chm applyrecalib.massvector chm applyrecalib.massvectorlist chm as.data.frame.mlist chm as.list.massvectorlist chm as.lm.calibintstat chm as.matrix.massvector chm as.matrix.mlist chm as.vector.calibintstat chm as.vector.calibrestat chm as.vector.massvector chm c.massvector chm c.massvectorlist chm cal chm calibexternal.massvector chm calibexternal.massvectorlist chm calibintstat chm caliblist chm calibrestat chm calibspline chm compare.massvector chm correctinternal.massvector chm correctinternal.massvectorlist chm diffFilter.massvector chm diffFilter.massvectorlist chm experiment.mlist chm gamasses.massvector chm gamasses.massvectorlist chm getPPGmasses chm getaccC chm getdiff.massvector chm getdiff.massvectorlist chm getextcalib.massvector chm getextcalib.massvectorlist chm getglobalcalib.massvectorlist chm getintcalib.massvector chm getintcalib.massvectorlist chm getrecalib.massvector chm getrecalib.massvectorlist chm globalcalib.massvectorlist chm hist.calibintlist chm hist.calibrelist chm hist.calibstat chm hist.massvector chm hist.massvectorlist chm hist.mylistobj chm histLengths chm image.massvector chm image.mlist chm image.mylistobj chm info.mylistobj chm info.myobj chm length.massvector chm mass.massvector chm massvector chm massvectorlist chm max.massvector chm mget.massvector chm mget.mlist chm mget.mylistobj chm mget.myobj chm min.massvector chm mscalib-internal chm mv1 chm mvFilter.massvector chm mvFilter.massvectorlist chm mvl chm mvll chm peaks.massvector chm plot.calibintlist chm plot.calibintstat chm plot.caliblist chm plot.calibrelist chm plot.calibspline chm plot.calibstat chm plot.massvector chm plot.massvectorlist chm plot.mylistobj chm ppg chm print.calibintstat chm print.caliblist chm print.calibrestat chm print.calibspline chm print.calibstat chm print.massvector chm print.massvectorlist chm project.massvectorlist chm readF.massvector chm readF.massvectorlist chm recalibrate.massvector chm recalibrate.massvectorlist chm residuals.massvector chm setParmsAssing.mylistobj chm setParmsAssing.myobj chm subset.mlist chm summary.calibintstat chm summary.calibspline chm summary.calibstat chm summary.massvector chm summary.mlist chm unlist.massvectorlist chm writeF.massvector chm writeF.massvectorlist chm wsFilter.massvector chm wsFilter.massvectorlist chm wsdist.massvector chm wsiFilter.massvector chm Microsoft HTML Help Compiler 4.74.8702 Compiling d:\Rcompile\CRANpkg\check\1.8\mscalib\chm\mscalib.chm HHC4007: Warning: The section "[.caliblist.html" is unrecognized. HHC4007: Warning: The section "[.massvector.html" is unrecognized. HHC4007: Warning: The section "[.massvectorlist.html" is unrecognized. HHC4007: Warning: The section "[Assing.massvectorlist.html" is unrecognized. HHC4007: Warning: The section "[[Assing.caliblist.html" is unrecognized. HHC4007: Warning: The section "[[Assing.massvectorlist.html" is unrecognized. HHC5013: Error: URL reference in the TOC cannot be resolved: "setParmsAssing.mylistobj.html". HHC5013: Error: URL reference in the TOC cannot be resolved: "setParmsAssing.myobj.html". HHC5013: Error: URL reference in the TOC cannot be resolved: "setParmsAssing.myobj.html". The following files were not compiled: adding MD5 sums installing R.css in d:/Rcompile/CRANpkg/check/1.8/mscalib.Rcheck * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking package dependencies ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for syntax errors ... OK * checking R files for library.dynam ... OK * checking S3 generic/method consistency ... OK * checking for replacement functions with final arg not named 'value' ... OK * checking Rd files ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking for CRLF line endings in C sources/headers ... OK * creating mscalib-Ex.R ... OK * checking examples ... OK * creating mscalib-manual.tex ... OK * checking mscalib-manual.tex ... OK