fsnps                  package:gap                  R Documentation

_A _c_a_s_e-_c_o_n_t_r_o_l _d_a_t_a _i_n_v_o_l_v_i_n_g _f_o_u_r _S_N_P_s _w_i_t_h _m_i_s_s_i_n_g _g_e_n_o_t_y_p_e

_D_e_s_c_r_i_p_t_i_o_n:

     This is a simulated data

_U_s_a_g_e:

     data(hla)

_F_o_r_m_a_t:

     A data frame

     _i_d subject id

     _y a column of 0/1 indicating case/control

     _s_i_t_e_1._a_1 SNP 1 allele a1

     _s_i_t_e_1._a_2 SNP 1 allele a2

     _s_i_t_e_2._a_1 SNP 2 allele a1

     _s_i_t_e_2._a_2 SNP 2 allele a2

     _s_i_t_e_3._a_1 SNP 3 allele a1

     _s_i_t_e_3._a_2 SNP 3 allele a2

     _s_i_t_e_4._a_1 SNP 4 allele a1

     _s_i_t_e_4._a_2 SNP 4 allele a2

     The last eight variables are genotypes for 4 SNPs, coded in
     characters

_S_o_u_r_c_e:

     Dr Sebastien Lissarrague of Genset

