Genetic analysis package

User Guides and Package Vignettes

aldh2	ALDH2 markers and Alcoholism
apoeapoc	APOE/APOC1 markers and Schizophrenia
bt	Bradley-Terry model for contingency table
chow.test	Chow's test for heterogeneity in two regressions
fbsize	Sample size for family-based linkage and association design
fsnps	A case-control data involving four SNPs with missing genotype
gc.em	Gene counting for haplotype analysis
gcontrol	genomic control
genecounting	Gene counting for haplotype analysis
gif	Kinship coefficient and genetic index of familiality
hap	Haplotype reconstruction
hap.em	Gene counting for haplotype analysis
hap.score	Score Statistics for Association of Traits with Haplotypes
hla	HLA markers and Schizophrenia
htr	Haplotype trend regression
hwe	Hardy-Weinberg equlibrium test
hwe.hardy	Hardy-Weinberg equlibrium test using MCMC
kbyl	LD statistics for two multiallelic loci
kin.morgan	kinship matrix for simple pedigree
makeped	A function to prepare pedigrees in post-MAKEPED format
mia	multiple imputation analysis for hap
mtdt	Transmission/disequilibrium test of a multiallelic marker
muvar	Means and variances under 1- and 2- locus (biallelic) QTL model
pbsize	Power for population-based association design
pfc	Probability of familial clustering of disease
pgc	Preparing weight for GENECOUNTING
s2k	Statistics for 2 by K table
tbyt	LD statistics for two SNPs
whscore	Whittemore-Halpern scores for allele-sharing