Entry: adjMatrix
Aliases: adjMatrix
Keywords: array algebra graphs multivariate
Description: Adjacency matrix of a graph
URL: ../../../library/ggm/html/adjMatrix.html

Entry: allEdges
Aliases: allEdges
Keywords: graphs models multivariate
Description: All edges of a graph
URL: ../../../library/ggm/html/allEdges.html

Entry: basiSet
Aliases: basiSet
Keywords: graphs models multivariate
Description: Basis set of a DAG
URL: ../../../library/ggm/html/basiSet.html

Entry: bfs
Aliases: bfs
Keywords: graphs models multivariate
Description: Breadth first search
URL: ../../../library/ggm/html/bfs.html

Entry: checkIdent
Aliases: checkIdent
Keywords: graphs models multivariate
Description: Identifiability of a model with one latent variable
URL: ../../../library/ggm/html/checkIdent.html

Entry: cliques
Aliases: cliques
Keywords: graphs models multivariate
Description: Cliques of an undirected graph
URL: ../../../library/ggm/html/cliques.html

Entry: cmpGraph
Aliases: cmpGraph
Keywords: graphs models multivariate
Description: The complementary graph
URL: ../../../library/ggm/html/cmpGraph.html

Entry: conComp
Aliases: conComp
Keywords: graphs models multivariate
Description: Connectivity components
URL: ../../../library/ggm/html/conComp.html

Entry: correlations
Aliases: correlations
Keywords: array graphs models multivariate
Description: Marginal and partial correlations
URL: ../../../library/ggm/html/correlations.html

Entry: cycleMatrix
Aliases: cycleMatrix
Keywords: graphs models multivariate
Description: Fundamental cycles
URL: ../../../library/ggm/html/cycleMatrix.html

Entry: DAG
Aliases: DAG
Keywords: graphs models multivariate
Description: Directed acyclic graphs (DAGs)
URL: ../../../library/ggm/html/DAG.html

Entry: drawGraph
Aliases: drawGraph
Keywords: graphs hplot iplot
Description: Drawing a graph with a simple point and click interface.
URL: ../../../library/ggm/html/drawGraph.html

Entry: dSep
Aliases: dSep
Keywords: graphs models multivariate
Description: d-separation
URL: ../../../library/ggm/html/dSep.html

Entry: edgeMatrix
Aliases: edgeMatrix
Keywords: array algebra graphs multivariate
Description: Edge matrix of a graph
URL: ../../../library/ggm/html/edgeMatrix.html

Entry: findPath
Aliases: findPath
Keywords: graphs
Description: Finding paths
URL: ../../../library/ggm/html/findPath.html

Entry: fitAncestralGraph
Aliases: fitAncestralGraph
Keywords: graphs models multivariate
Description: Fitting of Gaussian Ancestral Graph Models
URL: ../../../library/ggm/html/fitAncestralGraph.html

Entry: fitConGraph
Aliases: fitConGraph
Keywords: graphs models multivariate
Description: Fitting of Gaussian concentration graph models
URL: ../../../library/ggm/html/fitConGraph.html

Entry: fitCovGraph
Aliases: fitCovGraph
Keywords: graphs models multivariate
Description: Fitting of Gaussian covariance graph models
URL: ../../../library/ggm/html/fitCovGraph.html

Entry: fitDag
Aliases: fitDag
Keywords: graphs models multivariate
Description: Fitting of Gaussian DAG models
URL: ../../../library/ggm/html/fitDag.html

Entry: fitDagLatent
Aliases: fitDagLatent
Keywords: graphs models multivariate
Description: Fitting Gaussian DAG models with one latent variable
URL: ../../../library/ggm/html/fitDagLatent.html

Entry: fundCycles
Aliases: fundCycles
Keywords: graphs models multivariate
Description: Fundamental cycles
URL: ../../../library/ggm/html/fundCycles.html

Entry: ggm
Aliases: ggm
Keywords: multivariate models graphs
Description: The package 'ggm': summary information
URL: ../../../library/ggm/html/ggm.html

Entry: glucose
Aliases: glucose
Keywords: datasets
Description: Glucose control
URL: ../../../library/ggm/html/glucose.html

Entry: icf
Aliases: icf icfmag
Keywords: internal
Description: Iterative conditional fitting
URL: ../../../library/ggm/html/icf.html

Entry: In
Aliases: In
Keywords: array algebra graphs multivariate
Description: Indicator matrix
URL: ../../../library/ggm/html/In.html

Entry: InducedGraphs
Aliases: inducedCovGraph inducedConGraph InducedGraphs
Keywords: graphs models multivariate
Description: Graphs induced by marginalization or conditioning
URL: ../../../library/ggm/html/InducedGraphs.html

Entry: isAcyclic
Aliases: isAcyclic
Keywords: graphs models multivariate
Description: Graph queries
URL: ../../../library/ggm/html/isAcyclic.html

Entry: isGident
Aliases: isGident
Keywords: graphs models multivariate
Description: G-identifiability of an UG
URL: ../../../library/ggm/html/isGident.html

Entry: makeAG
Aliases: makeAG
Keywords: graphs models multivariate
Description: Ancestral Graphs
URL: ../../../library/ggm/html/makeAG.html

Entry: marks
Aliases: marks
Keywords: datasets
Description: Mathematics marks
URL: ../../../library/ggm/html/marks.html

Entry: parcor
Aliases: parcor
Keywords: array graphs models multivariate
Description: Partial correlations
URL: ../../../library/ggm/html/parcor.html

Entry: pcor
Aliases: pcor
Keywords: models multivariate
Description: Partial correlation
URL: ../../../library/ggm/html/pcor.html

Entry: pcor.test
Aliases: pcor.test
Keywords: htest multivariate
Description: Test for zero partial association
URL: ../../../library/ggm/html/pcor.test.html

Entry: rcorr
Aliases: rcorr
Keywords: distribution multivariate
Description: Random correlation matrix
URL: ../../../library/ggm/html/rcorr.html

Entry: rnormDag
Aliases: rnormDag
Keywords: distribution multivariate
Description: Random sample from a decomposable Gaussian model
URL: ../../../library/ggm/html/rnormDag.html

Entry: rsphere
Aliases: rsphere
Keywords: distribution multivariate
Description: Random vectors on a sphere
URL: ../../../library/ggm/html/rsphere.html

Entry: shipley.test
Aliases: shipley.test
Keywords: graphs models multivariate
Description: Test of all independencies implied by a given DAG
URL: ../../../library/ggm/html/shipley.test.html

Entry: Simple Graph Operations
Aliases: bd ch pa
Keywords: graphs models multivariate
Description: Simple graph operations
URL: ../../../library/ggm/html/SimpleGraphOperations.html

Entry: swp
Aliases: swp
Keywords: array algebra models multivariate
Description: Sweep operator
URL: ../../../library/ggm/html/swp.html

Entry: topSort
Aliases: topSort topOrder
Keywords: graphs models multivariate
Description: Topological sort
URL: ../../../library/ggm/html/topSort.html

Entry: transClos
Aliases: transClos
Keywords: graphs models multivariate
Description: Transitive closure of a graph
URL: ../../../library/ggm/html/transClos.html

Entry: triDec
Aliases: triDec
Keywords: array algebra models multivariate
Description: Triangular decomposition of a covariance matrix
URL: ../../../library/ggm/html/triDec.html

Entry: UG
Aliases: UG
Keywords: graphs models multivariate
Description: Defining an undirected graph (UG)
URL: ../../../library/ggm/html/UG.html

Entry: unmakeAG
Aliases: unmakeAG
Keywords: graphs models multivariate
Description: Ancestral Graph components
URL: ../../../library/ggm/html/unmakeAG.html
