* using log directory 'd:/Rcompile/CRANpkg/local/2.10/SNPMaP.cdm.Rcheck' * using R version 2.10.1 (2009-12-14) * using session charset: ISO8859-1 * checking for file 'SNPMaP.cdm/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'SNPMaP.cdm' version '1.0.0' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'SNPMaP.cdm' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... WARNING Missing link(s) in documentation object './man/GenomeWideSNP_5.Rd': '[SNPMaP:SNPMAP-package]{SNPMaP}' Missing link(s) in documentation object './man/GenomeWideSNP_6.Rd': '[SNPMaP:SNPMAP-package]{SNPMaP}' Missing link(s) in documentation object './man/Mapping250K_Nsp.Rd': '[SNPMaP:SNPMAP-package]{SNPMaP}' Missing link(s) in documentation object './man/Mapping250K_Sty.Rd': '[SNPMaP:SNPMAP-package]{SNPMaP}' See the information in section 'Cross-references' of the 'Writing R Extensions' manual. * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking data for non-ASCII characters ... OK * checking examples ... NONE * checking PDF version of manual ... OK