* using log directory 'd:/Rcompile/CRANpkg/local/2.10/hddplot.Rcheck'
* using R version 2.10.1 (2009-12-14)
* using session charset: ISO8859-1
* checking for file 'hddplot/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'hddplot' version '0.52'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'hddplot' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
accTrainTest: no visible binding for global variable 'Golub.BM'
accTrainTest: no visible binding for global variable 'cancer.BM'
accTrainTest: no visible binding for global variable 'gp.id'
aovFbyrow: no visible binding for global variable 'Golub'
aovFbyrow: no visible binding for global variable 'golub.info'
cvdisc: no visible binding for global variable 'GolubB'
cvdisc: no visible binding for global variable 'tissue.mfB'
cvscores: no visible binding for global variable 'BMonly.cv'
cvscores: no visible binding for global variable 'Golub.PBf'
defectiveCVdisc: no visible binding for global variable 'GolubB'
defectiveCVdisc: no visible binding for global variable 'tissue.mfB'
plotTrainTest: no visible binding for global variable 'Golub.BM'
plotTrainTest: no visible binding for global variable 'cancer.BM'
scoreplot: no visible binding for global variable 'miniG.scores'
* checking Rd files ... NOTE
prepare_Rd: accTrainTest.Rd:26-27: Dropping empty section \details
prepare_Rd: accTrainTest.Rd:38-39: Dropping empty section \note
prepare_Rd: accTrainTest.Rd:36: Dropping empty section \references
prepare_Rd: accTrainTest.Rd:40: Dropping empty section \seealso
prepare_Rd: aovFbyrow.Rd:25-26: Dropping empty section \note
prepare_Rd: aovFbyrow.Rd:23: Dropping empty section \references
prepare_Rd: cvdisc.Rd:53-54: Dropping empty section \note
prepare_Rd: cvscores.Rd:28-29: Dropping empty section \details
prepare_Rd: defectiveCVdisc.Rd:35-36: Dropping empty section \details
prepare_Rd: defectiveCVdisc.Rd:46-47: Dropping empty section \note
prepare_Rd: defectiveCVdisc.Rd:44: Dropping empty section \references
prepare_Rd: divideUp.Rd:24-25: Dropping empty section \details
prepare_Rd: divideUp.Rd:31-32: Dropping empty section \note
prepare_Rd: divideUp.Rd:29: Dropping empty section \references
prepare_Rd: pcp.Rd:33-34: Dropping empty section \details
prepare_Rd: pcp.Rd:44-45: Dropping empty section \note
prepare_Rd: pcp.Rd:42: Dropping empty section \references
prepare_Rd: plotTrainTest.Rd:28-29: Dropping empty section \details
prepare_Rd: plotTrainTest.Rd:35-36: Dropping empty section \note
prepare_Rd: plotTrainTest.Rd:33: Dropping empty section \references
prepare_Rd: plotTrainTest.Rd:37: Dropping empty section \seealso
prepare_Rd: scoreplot.Rd:51: Dropping empty section \references
prepare_Rd: simulateScores.Rd:25-26: Dropping empty section \details
prepare_Rd: simulateScores.Rd:36-37: Dropping empty section \note
prepare_Rd: simulateScores.Rd:34: Dropping empty section \references
prepare_Rd: simulateScores.Rd:38: Dropping empty section \seealso
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking PDF version of manual ... OK