DAG                     Directed acyclic graphs (DAGs)
In                      Indicator matrix
InducedGraphs           Graphs induced by marginalization or
                        conditioning
UG                      Defining an undirected graph (UG)
adjMatrix               Adjacency matrix of a graph
allEdges                All edges of a graph
basiSet                 Basis set of a DAG
bd                      Simple graph operations
bfs                     Breadth first search
checkIdent              Identifiability of a model with one latent
                        variable
cliques                 Cliques of an undirected graph
cmpGraph                The complementary graph
conComp                 Connectivity components
correlations            Marginal and partial correlations
cycleMatrix             Fundamental cycles
dSep                    d-separation
drawGraph               Drawing a graph with a simple point and click
                        interface.
edgeMatrix              Edge matrix of a graph
essentialGraph          Essential graph
findPath                Finding paths
fitAncestralGraph       Fitting of Gaussian Ancestral Graph Models
fitConGraph             Fitting of Gaussian concentration graph models
fitCovGraph             Fitting of Gaussian covariance graph models
fitDag                  Fitting of Gaussian DAG models
fitDagLatent            Fitting Gaussian DAG models with one latent
                        variable
fundCycles              Fundamental cycles
ggm                     The package 'ggm': summary information
glucose                 Glucose control
isAcyclic               Graph queries
isGident                G-identifiability of an UG
makeAG                  Ancestral Graphs
marks                   Mathematics marks
parcor                  Partial correlations
pcor                    Partial correlation
pcor.test               Test for zero partial association
rcorr                   Random correlation matrix
rnormDag                Random sample from a decomposable Gaussian
                        model
rsphere                 Random vectors on a sphere
shipley.test            Test of all independencies implied by a given
                        DAG
swp                     Sweep operator
topSort                 Topological sort
transClos               Transitive closure of a graph
triDec                  Triangular decomposition of a covariance matrix
unmakeAG                Ancestral Graph components
