* using log directory 'd:/Rcompile/CRANpkg/local/2.11/PKgraph.Rcheck'
* using R version 2.11.1 Patched (2010-07-29 r52657)
* using session charset: ISO8859-1
* checking for file 'PKgraph/DESCRIPTION' ... OK
* this is package 'PKgraph' version '1.4'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'PKgraph' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... WARNING
Loading required package: RGtk2
Loading required package: gWidgetsRGtk2
Loading required package: methods
Loading required package: gWidgets
Loading required package: utils
Loading required package: cairoDevice
Loading required package: lattice
Loading required package: rggobi
Loading required package: ggplot2
Loading required package: reshape
Loading required package: plyr

Attaching package: 'plyr'

The following object(s) are masked from 'package:gWidgets':

    id


Attaching package: 'reshape'

The following object(s) are masked from 'package:plyr':

    rename, round_any

Loading required package: grid
Loading required package: proto
Error in rename(x, .base_to_ggplot) : could not find function "setNames"
Error : unable to load R code in package 'ggplot2'
Error: package 'ggplot2' could not be loaded
Execution halted

It looks like this package (or one of its dependent packages) has an
unstated dependence on a standard package.  All dependencies must be
declared in DESCRIPTION.
See the information on DESCRIPTION files in the chapter 'Creating R
packages' of the 'Writing R Extensions' manual.
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... WARNING
Loading required package: methods
Loading required package: utils
Loading required package: proto
Loading required package: grid
Loading required package: reshape
Loading required package: plyr

Attaching package: 'reshape'

The following object(s) are masked from 'package:plyr':

    rename, round_any

Error in rename(x, .base_to_ggplot) : could not find function "setNames"
Error: unable to load R code in package 'ggplot2'
Execution halted

A namespace must be able to be loaded with just the base namespace loaded:
otherwise if the namespace gets loaded by a saved object, the session will
be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... WARNING
Error: package 'ggplot2' could not be loaded
Call sequence:
3: stop(gettextf("package '%s' could not be loaded", pkg), call. = FALSE, 
       domain = NA)
2: .getRequiredPackages2(pkgInfo)
1: library(package, lib.loc = lib.loc, character.only = TRUE, verbose = FALSE)
Execution halted
See the information on DESCRIPTION files in the chapter 'Creating R
packages' of the 'Writing R Extensions' manual.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
cleanFigureButtonHandler: no visible binding for global variable
  'pk.dialog.notebook'
com.hist.okButtonHandler: no visible binding for global variable
  'pk.dialog.notebook'
com.hist.okButtonHandler.0125: no visible binding for global variable
  'pk.dialog.notebook'
com.scatter.okButtonHandler: no visible binding for global variable
  'pk.dialog.notebook'
com.scatter.okButtonHandler.0125: no visible binding for global
  variable 'pk.dialog.notebook'
com.time.okButtonHandler: no visible binding for global variable
  'pk.dialog.notebook'
com.time.okButtonHandler.back: no visible binding for global variable
  'pk.dialog.notebook'
compare.pred.ggobiImageHandler: no visible binding for global variable
  'pk.dialog.notebook'
model.cov.okButtonHandler: no visible binding for global variable
  'pk.dialog.notebook'
model.ggobiImageHandler: no visible binding for global variable
  'pk.dialog.notebook'
model.gof.okButtonHandler: no visible binding for global variable
  'pk.dialog.notebook'
model.ind.okButtonHandler: no visible binding for global variable
  'pk.dialog.notebook'
model.para.okButtonHandler: no visible binding for global variable
  'pk.dialog.notebook'
model.random.okButtonHandler: no visible binding for global variable
  'pk.dialog.notebook'
model.resid.okButtonHandler: no visible binding for global variable
  'pk.dialog.notebook'
model.struct.okButtonHandler: no visible binding for global variable
  'pk.dialog.notebook'
openDataHandler : <anonymous> : <anonymous>: no visible binding for
  '<<-' assignment to 'test'
openDataHandler : <anonymous> : <anonymous>: no visible binding for
  global variable 'test'
psn.bootstrap: no visible binding for global variable
  'minimization.successful'
psn.bootstrap: no visible binding for global variable
  'covariance.step.successful'
psn.bootstrap: no visible binding for global variable
  'covariance.step.warnings'
psn.bootstrap: no visible binding for global variable
  'estimate.near.boundary'
psn.bootstrap: no visible binding for global variable
  'pk.dialog.notebook'
psn.bootstrap.sum.okButtonHandler: no visible binding for global
  variable 'pk.dialog.notebook'
psn.bootstrap.sum.okButtonHandler: no visible binding for global
  variable 'minimization.successful'
psn.bootstrap.sum.okButtonHandler: no visible binding for global
  variable 'covariance.step.successful'
psn.bootstrap.sum.okButtonHandler: no visible binding for global
  variable 'covariance.step.warnings'
psn.bootstrap.sum.okButtonHandler: no visible binding for global
  variable 'estimate.near.boundary'
psn.bootstrap.vis.okButtonHandler: no visible binding for global
  variable 'pk.dialog.notebook'
psn.bootstrap.vis.okButtonHandler: no visible binding for global
  variable 'ID'
psn.bootstrap.vis.okButtonHandler: no visible binding for global
  variable 'resampleID'
psn.bootstrap.vis.okButtonHandler: no visible binding for global
  variable 'para'
psn.bootstrap.vis.okButtonHandler: no visible binding for global
  variable 'VAR'
psn.cdd: no visible binding for global variable
  'minimization.successful'
psn.cdd: no visible binding for global variable
  'covariance.step.successful'
psn.cdd: no visible binding for global variable
  'covariance.step.warnings'
psn.cdd: no visible binding for global variable
  'estimate.near.boundary'
psn.cdd: no visible binding for global variable 'outside.n.sd'
psn.outlier.okButtonHandler: no visible binding for global variable
  'pk.dialog.notebook'
psn.outlier.okButtonHandler: no visible binding for global variable
  'ID'
psn.outlier.okButtonHandler: no visible binding for global variable
  'cook.scores'
psn.outlier.okButtonHandler: no visible binding for global variable
  'cov.ratios'
saveImageHandler: no visible binding for global variable
  'pk.dialog.notebook'
saveImageHandler.matrix: no visible binding for global variable
  'pk.dialog.notebook'
saveImageHandler.pkmodel: no visible binding for global variable
  'pk.dialog.notebook'
summary.bi.ggobiImageHandler: no visible binding for global variable
  'pk.dialog.notebook'
summary.bi.okButtonHandler: no visible binding for global variable
  'pk.dialog.notebook'
summary.heat.okButtonHandler: no visible binding for global variable
  'pk.dialog.notebook'
summary.matrix.ggobiImageHandler: no visible binding for global
  variable 'pk.dialog.notebook'
summary.matrix.okButtonHandler: no visible binding for global variable
  'pk.dialog.notebook'
summary.para.ggobiImageHandler: no visible binding for global variable
  'pk.dialog.notebook'
summary.para.okButtonHandler: no visible binding for global variable
  'pk.dialog.notebook'
summary.tri.okButtonHandler: no visible binding for global variable
  'pk.dialog.notebook'
summary.uni.ggobiImageHandler: no visible binding for global variable
  'pk.dialog.notebook'
summary.uni.okButtonHandler: no visible binding for global variable
  'pk.dialog.notebook'
val.okButtonHandler: no visible binding for global variable
  'pk.dialog.notebook'
validation.ggobiImageHandler: no visible binding for global variable
  'pk.dialog.notebook'
vis.outlier.okButtonHandler: no visible binding for global variable
  'pk.dialog.notebook'
vis.outlier.okButtonHandler: no visible binding for global variable
  'runID'
vis.outlier.okButtonHandler: no visible binding for global variable
  'deleteID'
vis.outlier.okButtonHandler: no visible binding for global variable
  'ID'
vis.outlier.okButtonHandler: no visible binding for global variable
  'para'
vis.outlier.okButtonHandler: no visible binding for global variable
  'resampleID'
vis.outlier.okButtonHandler: no visible binding for global variable
  'variable'
vis.outlier.okButtonHandler: no visible binding for global variable
  'value'
vis.outlier.okButtonHandler: no visible binding for global variable
  'rng'
vis.outlier.okButtonHandler: no visible binding for global variable
  'cor1'
vis.outlier.okButtonHandler: no visible binding for global variable
  'cor2'
* checking Rd files ... NOTE
prepare_Rd: PKgraph.Rd:11-13: Dropping empty section \arguments
prepare_Rd: PKgraph.Rd:17-19: Dropping empty section \examples
prepare_Rd: pkdata.Rd:9-11: Dropping empty section \format
prepare_Rd: pkdata.Rd:14-16: Dropping empty section \examples
prepare_Rd: pkdata2.Rd:9-11: Dropping empty section \format
prepare_Rd: pkdata2.Rd:14-16: Dropping empty section \examples
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... NONE
* checking package vignettes in 'inst/doc' ... OK
* checking PDF version of manual ... OK