* using log directory 'd:/Rcompile/CRANpkg/local/2.11/caret.Rcheck'
* using R version 2.11.1 Patched (2010-07-29 r52657)
* using session charset: ISO8859-1
* checking for file 'caret/DESCRIPTION' ... OK
* this is package 'caret' version '4.85'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'caret' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
QuinlanAttributes.data.frame: no visible binding for global variable
  'QuinlanDescription'
QuinlanAttributes.matrix: no visible binding for global variable
  'QuinlanDescription'
bwplot.diff.resamples: no visible binding for global variable 'Metric'
bwplot.resamples: no visible binding for global variable 'Model'
bwplot.resamples: no visible binding for global variable 'Metric'
checkConditionalX: no visible binding for global variable '.outcome'
classLevels.splsda: no visible global function definition for 'ilevels'
createGrid : lvqGrid: no visible binding for global variable '.k'
createGrid : lvqGrid: no visible binding for global variable '.size'
createModel: possible error in rda(trainX, trainY, gamma =
  tuneValue$.gamma, lambda = tuneValue$.lambda, ...): unused
  argument(s) (gamma = tuneValue$.gamma, lambda = tuneValue$.lambda)
createModel: no visible global function definition for
  'randomForestNWS'
createModel: no visible global function definition for 'rfLSF'
createModel: possible error in rvm(as.matrix(trainX), trainY, kernel =
  polydot, kpar = list(degree = tuneValue$.degree, scale =
  tuneValue$.scale, offset = 1), ...): unused argument(s) (kernel =
  polydot, kpar = list(degree = tuneValue$.degree, scale =
  tuneValue$.scale, offset = 1))
createModel: possible error in rvm(as.matrix(trainX), trainY, kernel =
  rbfdot, kpar = list(sigma = tuneValue$.sigma), ...): unused
  argument(s) (kernel = rbfdot, kpar = list(sigma = tuneValue$.sigma))
createModel: possible error in rvm(as.matrix(trainX), trainY, kernel =
  vanilladot(), ...): unused argument(s) (kernel = vanilladot())
densityplot.diff.resamples: no visible binding for global variable
  'Metric'
densityplot.diff.resamples: no visible binding for global variable
  'ind'
densityplot.resamples: no visible binding for global variable 'Model'
densityplot.resamples: no visible binding for global variable 'Metric'
dotplot.resamples: no visible binding for global variable 'Model'
dotplot.resamples: no visible binding for global variable 'Metric'
icr.formula: no visible binding for global variable 'thresh'
levelplot.diff.resamples: no visible binding for global variable
  'Metric'
plot.rfe: no visible binding for global variable 'Selected'
plot.train: no visible binding for global variable 'parameter'
plotClassProbs: no visible binding for global variable 'Observed'
predictionFunction: possible error in attributes(modelFit, "model"):
  unused argument(s) ("model")
predictionFunction: no visible binding for global variable '.alpha'
predictors.gbm: no visible binding for global variable 'rel.inf'
predictors.sda: no visible binding for global variable 'varIndex'
predictors.smda: no visible binding for global variable 'varIndex'
resamples.default: no visible binding for global variable 'Variables'
rfe.default: no visible binding for global variable 'Variables'
splom.resamples: no visible binding for global variable 'Model'
splom.resamples: no visible binding for global variable 'Metric'
tuneScheme: no visible binding for global variable '.alpha'
tuneScheme: no visible binding for global variable '.phi'
tuneScheme: no visible binding for global variable '.lambda'
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking data for non-ASCII characters ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $BLAS_LIBS ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... NOTE
*** PDFLaTeX Errors ***
File d:/Rcompile/CRANpkg/local/2.11/caret.Rcheck/inst/doc/caretMisc.Rnw :
running 'texi2dvi' on 'caretMisc.tex' failed
LaTeX errors:
d:/Rcompile/CRANpkg/local/2.11/caret.Rcheck/inst/doc/caretMisc.tex:296: Undefin
ed control sequence
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
d:/Rcompile/CRANpkg/local/2.11/caret.Rcheck/inst/doc/caretMisc.tex:297: Undefin
ed control sequence
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
File d:/Rcompile/CRANpkg/local/2.11/caret.Rcheck/inst/doc/caretSelection.Rnw :
running 'texi2dvi' on 'caretSelection.tex' failed
LaTeX errors:
d:/Rcompile/CRANpkg/local/2.11/caret.Rcheck/inst/doc/caretSelection.tex:99: Und
efined control sequence
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
d:/Rcompile/CRANpkg/local/2.11/caret.Rcheck/inst/doc/caretSelection.tex:100: Un
defined control sequence
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
d:/Rcompile/CRANpkg/local/2.11/caret.Rcheck/inst/doc/caretSelection.tex:101: Un
defined control sequence
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
d:/Rcompile/CRANpkg/local/2.11/caret.Rcheck/inst/doc/caretSelection.tex:151: Un
defined control sequence
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
d:/Rcompile/CRANpkg/local/2.11/caret.Rcheck/inst/doc/caretSelection.tex:152: Un
defined control sequence
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
d:/Rcompile/CRANpkg/local/2.11/caret.Rcheck/inst/doc/caretSelection.tex:153: Un
defined control sequence
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
File d:/Rcompile/CRANpkg/local/2.11/caret.Rcheck/inst/doc/caretTrain.Rnw :
running 'texi2dvi' on 'caretTrain.tex' failed
LaTeX errors:
d:/Rcompile/CRANpkg/local/2.11/caret.Rcheck/inst/doc/caretTrain.tex:118: Undefi
ned control sequence
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
d:/Rcompile/CRANpkg/local/2.11/caret.Rcheck/inst/doc/caretTrain.tex:119: Undefi
ned control sequence
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
d:/Rcompile/CRANpkg/local/2.11/caret.Rcheck/inst/doc/caretTrain.tex:120: Undefi
ned control sequence
The control sequence at the end of the top line
of your error message was never \def'ed. If you have
misspelled it (e.g., `\hobx'), type `I' and the correct
* checking PDF version of manual ... OK