ChemoSpec-package       Exploratory Chemometrics for Spectroscopy
CuticleIR               IR Spectra of Plant Cuticles by Genotype and
                        Treatment
Spectra                 Spectra Objects
SrE.IR                  IR and NMR Spectra of Serenoa repens (Saw
                        Palmetto) Oil Extracts and Reference Oils
aovPCA                  ANOVA-PCA Analysis of Spectra Data
aovPCAloadings          Plot aovPCA Loadings of a Spectra Object
aovPCAscores            Conduct PCA and plot aovPCA Scores of a Spectra
                        Object
avgFacLvls              Average levels of a factor in a data matrix
binBuck                 Bin or Bucket a Spectra Object
binData                 Bin or Bucket Data
check4Gaps              Check for Missing Values (Gaps)
chkSpectra              Verify the Integrity of a Spectra Object
classPCA                Classical PCA of Spectra Objects
colLeaf                 Color the Leaves of a Dendrogram
colorSymbol             Colors and Symbols in ChemoSpec and Spectra
                        Objects
conColScheme            Change the Color Scheme of a Spectra Object
coordProjCS             Modified Version of coordProj from mclust
getManyCsv              Merge CSV Files in a Directory into a Spectra
                        Object
groupNcolor             Assign Group Membership and Colors for a
                        Spectra Object
hcaScores               HCA on PCA scores from a Spectra Object
hcaSpectra              Plot HCA Results of a Spectra Object
hmapSpectra             Create a Seriated Heat Map Comparing Samples
                        and Spectral Data for a Spectra Object
hypTestScores           Conduct MANOVA using PCA Scores and Factors in
                        a Spectra Object
isWholeNo               Determine if a Number is a Whole Number
labelExtremes           Label Extreme Values in a 2D Data Set
labelExtremes3d         Identify Extreme Values in 3D
makeEllipsoid           Create Ellipsoid
mclust3D                mclust Analysis in 3D
mclust3dSpectra         mclust Analysis of a Spectra Object in 3D
mclustSpectra           mclust Analysis of a Spectra Object PCA Results
normSpectra             Normalize a Spectra Object
normVec                 Normalize a Vector to range -1 to +1
pcaBoot                 Cross-Validation of Classical PCA Results for a
                        Spectra Object
pcaDiag                 Outlier Diagnostic Plots for PCA of a Spectra
                        Object
plot2Loadings           Plot PCA Loadings from a Spectra object Against
                        Each Other
plotHCA                 Plot Dendrogram for Spectra Object
plotLoadings            Plot PCA Loadings for a Spectra Object
plotScores              Plot PCA Scores of a Spectra Object
plotScores3D            3D PCA Score Plot for a Spectra Object
plotScoresCor           Compute Confidence Ellipses
plotScoresDecoration    Decorate PCA Score Plot of a Spectra Object
plotScoresG             Plot PCA Scores of a Spectra Object using GGobi
plotScoresRGL           Interactive 3D Score Plot of a Spectra Object
plotScree               Scree Plot of PCA Results for a Spectra Object
plotSpectra             Plot Spectra Object
q2rPCA                  Conversion Between PCA Classes
removeFreq              Remove Frequencies from a Spectra Object
removeSample            Remove Samples from a Spectra Object
robPCA                  Robust PCA of a Spectra Object
rowDist                 Compute Distance Between Rows of a Matrix
sPlotSpectra            s-Plot of Spectra Data
seXy                    Functions to Compute Measures of Central
                        Tendency and Spread.  seX!
shrinkLeaf              Shrink the Leaves of a Dendrogram
specSurvey              Plot Measures of Central Tendency and Spread
                        for a Spectra Object
splitSpectraGroups      Create New Groups from an Existing Spectra
                        Object
sumGroups               Summarize the Group Parameters of a Spectra
                        Object
sumSpectra              Summarize a Spectra Object
