C.score                 Calculates the (normalised) mean number of
                        checkerboard combinations (C-score) in a matrix
H2fun                   Specialisation of a bipartite web.
ND                      Normalised degree, betweenness and closeness
                        centrality
PAC                     Potential for Apparent Competition
PDI                     Paired Differences Index
Safariland              A pollination web from Argentina
V.ratio                 Calculates the variance-ratio as suggested by
                        Schluter (1984)
as.one.mode             Conversion of a network matrix
barrett1987             Individuals caught in a pollination web in
                        boreal Canada.
bezerra2009             Individuals observed in a flower-visitation
                        networks of oil-collecting bees in a Brazilian
                        steppe.
bipartite-package       Analysis of bipartite ecological webs.
compart                 Detects compartments
computeModules          Function "computeModules"
degreedistr             Fits functions to cumulative degree
                        distributions of both trophic levels of a
                        network.
dfun                    Calculates standardised specialisation index d'
                        (d prime) for each species in the lower trophic
                        level of a bipartite network.
discrepancy             Calculates discrepancy of a matrix
elberling1999           No. of visits in a pollination web of
                        arctic-alpine Sweden
empty                   Deletes empty rows and columns from a matrix.
extinction              Simulates extinction of a species from a
                        bipartite network
genweb                  Generate a random bipartite web
inouye1988              A pollination network from the Snowy Mountains
                        of New South Wales, Australia
kato1990                No. of individuals caught in a pollination web
                        of a Japanese beech forest
kevan1970               A pollination network from Northern Ellesmere
                        Island, Canada
listModuleInformation   Function "listModuleInformation"
memmott1999             Flower visitation network from a meadow near
                        Bristol, UK
moduleWeb-class         Class "moduleWeb"
mosquin1967             Flower visitation network from Melville Island,
                        Northwest Territories, Canada
motten1982              A spring flower visitation network from North
                        Carolina, USA
nested                  Calculates any of several measures of
                        nestedness
nestedness              Calculates nestedness temperature of
                        presence/absence matrices
networklevel            Analysis of bipartite webs at the level of the
                        entire network
nodespec                Calculates the node-based specialisation index
null.distr              Null model based on fitted marginal
                        distribution
null.t.test             Compares observed pattern to random webs.
nullmodel               Generates null models for network analysis
olesen2002aigrettes     A flower visitation network from the Azores
olesen2002flores        Another flower visitation network from the
                        Azores
ollerton2003            ollerton2003
plotModuleWeb           Function "plotModuleWeb"
plotPAC                 Function to draw a circular plot to visualise
                        potential apparent competition (PAC)
plotweb                 Visualize a bipartite interaction matrix (e.g.
                        a foodweb)
plotweb2                Visualize a tripartite interaction matrix (e.g.
                        a tritrophic foodweb)
printoutModuleInformation
                        Function printoutModuleInformation
robustness              Robustness to species extinctions
schemske1978            A flower visitation network from Urbana, IL,
                        USA
second.extinct          Secondary extinctions in bipartite networks
shuffle.web             Shuffle web entries
slope.bipartite         Slope of extinction simulation
small1976               A flower visitation network from a peat bog in
                        Ottawa, Canada
sortweb                 Function to sort bipartite webs
specieslevel            Calculate various indices for network
                        properties at the species level
swap.web                Creates null model for bipartite networks
togetherness            Calculates the number of identical co-presences
                        and co-absences for species-on-islands
vazarr                  A pollination network.
vazcer                  A pollination network.
vazllao                 A pollination network.
vazmasc                 A pollination network.
vazmasnc                A pollination network.
vaznull                 Null model with constrained totals and
                        connectance
vazquec                 A pollination network.
vazquenc                A pollination network.
vazquez.example         Examples for some analyses
visweb                  Plotting function to visualize a bipartite food
                        web
web2edges               Conversion of a network matrix into a
                        (weighted) edge list
wine                    Weighted-Interaction Nestedness Estimator
