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| aplMeta | alignedPeakListMetaData generation |
| chargeBkgr_call | charge accumulation baseline calculation |
| circShift | Circular shift of data record |
| coefNLFiltGG | Nonlinear target filter coefficients for Gaussian wavelet |
| coefNLFiltGL | Nonlinear target filter coefficients for Gaussian-Lorentizan signal |
| coefNLFiltLL | Nonlinear target filter coefficients for Lorentzian signal |
| coefOptFiltGG | Optimal linear target filter coefficients for Gaussian wavelet |
| coefOptFiltGL | Optimal linear target filter coefficients for Gaussian-Lorentzian peak |
| coefOptFiltLL | Optimal linear target filter coefficients for Lorentzian signal |
| coefTrunc | Wavelet truncation |
| ExpBkgr_call | Analytical background correction |
| findBsEnv | Baseline envelope calculation |
| gausHalf | Left-half Gaussian wavelet |
| gausRHalf | Right-half Gaussian wavelet |
| geomavFilt | Non-linear target filter |
| globalAlign | Global alignment |
| hwfmGausPeak | Gaussian peak-HWFM estimate |
| locjitdet | Local shift detection |
| lorHalf | Right-half Lorentzian wavelet |
| lorLHalf | Left-half Lorentzian wavelet |
| mainRTOFsPROc | Signal processing for TOF MS |
| mainRTOFsPROcModular | Signal processing for TOF MS |
| matchedFilter | Matched filter |
| matchFiltCoefGG | Matched filter coefficients for Gaussian signal |
| matchFiltCoefGL | Matched filter coefficients for Gaussian-Lorentzian signal |
| matchFiltCoefLL | Matched filter coefficients for Lorentzian signal |
| mavSmoothing | Moving average filter |
| msResample | Integrative down-sampling |
| myxcorr | Cross-correlation of two vectors |
| noiseEstmtr2 | Gaussian noise STD-estimator |
| offsetBkgr_call | Constant ADC offset background |
| optFilt | Optimal linear filter |
| OutputForML | Output for Matlab |
| peakAlignAv | Peak alignment to average spectrum |
| peakWidth | Peak half-width estimate |
| pedRmMAV_call | Removes peak pedestal |
| pivPeak | Pivot peak detection |
| pivpeak | Pivot peak detection |
| plMeta | Peak list meta-data maker |
| trgFilt | Target filter coefficients |
| trivPP_call | Trivial peak detection |
| userError | Stops execution with user defined message |