Fishery Stock Assessment by Catch Dynamic Models

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Documentation for package ‘CatDyn’ version 1.0-3

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CatDyn-package Fisheries Stock Assessment by Catch Dynamic Models
CatDyn Fisheries Stock Assessment by Catch Dynamic Models
catdyn Fit Catch Dynamic Models by Maximum Likelihood
CatDynData Generic CatDyn Data Plotting
CatDynMod Generic CatDyn Results Plot
CDMN0P Implementing a Pure Depletion Catch Dynamic Model to Examine Parameter Values
CDMN0P.Lik Likelihood Evaluation of Pure Depletion Catch Dynamic Model
CDMN0P.Lik.gr Calculate Analytical Gradients for the Pure Depletion Model (Beta Testing)
CDMN1P Implementing a 1-Perturbation Catch Dynamic Model to Examine Parameter Values
CDMN1P.Lik Likelihood Evaluation of 1-Perturbation Catch Dynamic Model
CDMN1P.Lik.gr Calculate Analytical Gradients for the 1-Perturbation Model (Beta Testing)
CDMN2P Implementing a 2-Perturbations Catch Dynamic Model to Examine Parameter Values
CDMN2P.Lik Likelihood Evaluation of 2-Perturbations Catch Dynamic Model
CDMN2P.Lik.gr Calculate Analytical Gradients for the 2-Perturbations Model (Beta Testing)
CDMN3P Implementing a 3-Perturbations Catch Dynamic Model to Examine Parameter Values
CDMN3P.Lik Likelihood Evaluation of 3-Perturbations Catch Dynamic Model
CDMN3P.Lik.gr Calculate Analytical Gradients for the 3-Perturbations Model (Beta Testing)
CDMN4P Implementing a 4-Perturbations Catch Dynamic Model to Examine Parameter Values
CDMN4P.Lik Likelihood Evaluation of 4-Perturbations Catch Dynamic Model
CDMN4P.Lik.gr Calculate Analytical Gradients for the 4-Perturbations Model (Beta Testing)
plot.CatDynData Exploratory analysis of catch and effort fisheries data on a graphical display
plot.CatDynMod Examining Model Predictions of Catch Dynamic Models on a Graphical Display
SeasonData.1990.S1.B Processed Data to Fit Catch Dynamic Models