ChemoSpec-package       Exploratory Chemometrics for Spectroscopy
CuticleIR               IR Spectra of Plant Cuticles by Genotype and
                        Treatment
LoopThruSpectra         Display the spectra in a Spectra object one at
                        a time
Spectra                 Spectra Objects
SrE.IR                  IR and NMR Spectra of Serenoa repens (Saw
                        Palmetto) Oil Extracts and Reference Oils
aovPCA                  ANOVA-PCA Analysis of Spectra Data
aovPCAloadings          Plot aovPCA Loadings of a Spectra Object
aovPCAscores            Conduct PCA and plot aovPCA Scores of a Spectra
                        Object
avgFacLvls              Average levels of a factor in a data matrix
baselineSpec            Carry out baseline correction on a Spectra
                        object
binBuck                 Bin or Bucket a Spectra Object
binData                 Bin or Bucket Data
check4Gaps              Check for Missing Values (Gaps)
chkSpectra              Verify the Integrity of a Spectra Object
classPCA                Classical PCA of Spectra Objects
colLeaf                 Color the Leaves of a Dendrogram
colorSymbol             Colors and Symbols in ChemoSpec and Spectra
                        Objects
conColScheme            Change the Color Scheme of a Spectra Object
coordProjCS             Modified Version of coordProj from mclust
getManyCsv              Merge CSV Files in a Directory into a Spectra
                        Object
groupNcolor             Assign Group Membership and Colors for a
                        Spectra Object
hcaScores               HCA on PCA scores from a Spectra Object
hcaSpectra              Plot HCA Results of a Spectra Object
hmapSpectra             Create a Seriated Heat Map Comparing Samples
                        and Spectral Data for a Spectra Object
hypTestScores           Conduct MANOVA using PCA Scores and Factors in
                        a Spectra Object
isWholeNo               Determine if a Number is a Whole Number
labelExtremes           Label Extreme Values in a 2D Data Set
labelExtremes3d         Identify Extreme Values in 3D
makeEllipsoid           Create Ellipsoid
mclust3D                mclust Analysis in 3D
mclust3dSpectra         mclust Analysis of a Spectra Object in 3D
mclustSpectra           mclust Analysis of a Spectra Object PCA Results
normSpectra             Normalize a Spectra Object
normVec                 Normalize a Vector to range -1 to +1
pcaBoot                 Cross-Validation of Classical PCA Results for a
                        Spectra Object
pcaDiag                 Outlier Diagnostic Plots for PCA of a Spectra
                        Object
plot2Loadings           Plot PCA Loadings from a Spectra object Against
                        Each Other
plotHCA                 Plot Dendrogram for Spectra Object
plotLoadings            Plot PCA Loadings for a Spectra Object
plotScores              Plot PCA Scores of a Spectra Object
plotScores3D            3D PCA Score Plot for a Spectra Object
plotScoresCor           Compute Confidence Ellipses
plotScoresDecoration    Decorate PCA Score Plot of a Spectra Object
plotScoresG             Plot PCA Scores of a Spectra Object using GGobi
plotScoresRGL           Interactive 3D Score Plot of a Spectra Object
plotScree               Scree Plot of PCA Results for a Spectra Object
plotSpectra             Plot Spectra Object
q2rPCA                  Conversion Between PCA Classes
removeFreq              Remove Frequencies from a Spectra Object
removeSample            Remove Samples from a Spectra Object
robPCA                  Robust PCA of a Spectra Object
rowDist                 Compute Distance Between Rows of a Matrix
sPlotSpectra            s-Plot of Spectra Data
seXy                    Functions to Compute Measures of Central
                        Tendency and Spread.  seX!
shrinkLeaf              Shrink the Leaves of a Dendrogram
specSurvey              Plot Measures of Central Tendency and Spread
                        for a Spectra Object
splitSpectraGroups      Create New Groups from an Existing Spectra
                        Object
sumGroups               Summarize the Group Parameters of a Spectra
                        Object
sumSpectra              Summarize a Spectra Object
