DRI-package             DR-Integrator: an analytic tool for integrating
                        DNA copy number and gene expression data
drcorrelate             Compute correlations between DNA copy number
                        and gene expression for each gene
drcorrelate.null        Generate null distribution for DR-Correlate
                        analysis
dri.correlation.plot    Plot significant correlations from DR-Correlate
                        analysis
dri.fdrCutoff           Determine cutoff score for a desired false
                        discovery rate (FDR)
dri.heatmap             Generate a heatmap of significant DR-Correlate
                        genes
dri.impute              Impute missing values for gene expression data
dri.merge.CNbyRNA       Merge DNA copy number and gene expression data
                        sets
dri.sig_genes           Determine significant genes for DR-Correlate or
                        DR-SAM analysis
dri.smooth.cghdata      Smooth DNA copy number data over a specific
                        window size
drsam                   Perform supervised learning analysis between 2
                        sample classes for DNA/RNA differences
drsam.null              Generate null distribution for DR-SAM analysis
mySampleData            DR-Integrator Sample Data
runFusedLasso           Wrapper function to run cghFLasso
