Normalize expression data using equivalently expressed genes

Documentation for package ‘EquiNorm’ version 2.0

EquiNorm-package	Normalize expression data using equivalently expressed genes
data.simulated	A list containing simulated datasets.
data.x	A vector indicating group (e.g. disease status) for each subject.
data.y	An array of gene expression data.
equi.gene.norm	Normalize expression data using equivalently expressed genes
EquiNorm	Normalize expression data using equivalently expressed genes
est.hat	List containing the estimates from the hierarchical mixture model.
lambda.start	Starting value for proportion of over-expressed genes.
lemma.maxIts	Maximum number of iterations for lemma.
lemma.outdir	Directory for lemma output.
lemma.plots	A logical value indicating whether lemma should generate plots.
lemma.tol	Tolerance for lemma convergence.
maxIter	Maximum number of iterations for EquiNorm.
pi.start	Starting value for proportion of differentially expressed genes.
tolerance	Tolerance for EquiNorm convergence.