CSEGriskfigure          Plot Extinction Risk Metrics
CSEGtmufigure           Plot Forecast Uncertainty
MARSS                   Interface MARSS Model Specification and
                        Estimation
MARSS-package           Multivariate Autoregressive State-Space Model
                        Estimation
MARSSLLprofile          Log-likelihood profiles for MARSS Parameters
MARSSaic                AIC for MARSS models
MARSSapplynames         Names for marssMLE Object Components
MARSSboot               Bootstrap MARSS Parameter Estimates
MARSScheckdims          MARSS Utilities
MARSShatyt              Compute Expected Value of Y,YY, and YX
MARSShessian            MARSS Parameter Variance-Covariance Matrix from
                        the Hessian Matrix
MARSSinits              Initial Values for MLE
MARSSinnovationsboot    Bootstrapped Data using Stoffer and Wall's
                        Algorithm
MARSSkem                Maximum Likelihood Estimation for Multivariate
                        Autoregressive State-Space Models
MARSSkemcheck           Model Checking for MLE objects passed to
                        MARSSkem
MARSSkf                 Kalman Filtering and Smoothing
MARSSmcinit             Monte Carlo Initialization
MARSSoptim              Parameter estimation for MARSS models using
                        optim
MARSSoptions            Change MARSS Defaults Utility
MARSSparamCIs           Confidence Intervals for MARSS Parameters
MARSSresids             MARSS standardized residuals
MARSSsimulate           Simulate Data from a MARSS Model and Parameter
                        Estimates
MARSSvectorizeparam     Vector to Parameter Matrix Conversion
allowed                 MARSS function defaults and allowed methods
checkPopWrap            Check Arguments to popWrap()
graywhales              Population Data Sets
harborSeal              Harbor Seal Population Count Data (Log counts)
is.blockdiag            Matrix Utilities
ivesDataLP              Plankton Data Sets
loggerhead              Loggerhead Turtle Tracking Data
marssMLE                Maximum Likelihood MARSS Estimation Object
marssMLE-class          Class "marssMLE"
marssm                  Model Objects
marssm-class            Class "marssm"
popWrap                 Wrapper Objects
popWrap-class           Class "popWrap"
stdInnov                Standardized Innovations
