MSToolkit-package       Generates and analyzes simulated trial data
addResidualError        Add residual error to the response.
allocateTreatments      Allocate treatment to subjects
analyzeData             Analyze simulated data replicates
analyzeRep              Analyse a single replicate of data
checkDropOutFun         check the user supplied drop out function
checkMacroFormat        check the macro format dataset
checkMicroFormat        Check that an input data structure is a valid
                        "Micro Evaluation" structure
checkSymmetricPDMatrix
                        Checks if a matrix is symmetric and positive
                        definite
compileSummary          Compile all Micro or Macro evaluation data
convertToSASCode        Convert R to SAS Statements
createContinuousCovariates
                        Create a set of continuous covariates
createCovariates        Create covariates
createDirectories       Create replicate data, micro evaluation, and
                        macro evaluation directories
createDiscreteCovariates
                        Create covariates from a discrete distribution
createDropout           Adds dropout to a simulated dataset
createEmptyMicro        Create an empty micro evaluation data frame
createExternalCovariates
                        Create covariates by sampling from an external
                        file
createExternalParameters
                        Sample parameters from an external file
createInterims          create the interim flag
createMCAR              Missing Completely at Random
createNormalParameters
                        Create parameters based on a multivariate
                        normal distribution
createParameters        Create parameter data for subjects in a
                        simulated trial
createResponse          High-level function for the response component.
createResponseVariable
                        Create a response from a data set and an
                        equation
createTreatments        Create Treatment Design Data
ectdStop                Error handling functions for the ectd package.
ectdVerbose             MSToolkit package options
generateData            Generate simulated data replicates
initialChar             Convert the first letter that occurs in a
                        string to lower case
interimAnalysis         interim Analysis
macroEvaluation         Macro Evaluation
mstoolkitUnitTests      Unit/System Tests suite for the MSToolkit
                        package
parseCharInput          Parse a comma seperated string
parseCovMatrix          Parse a covariance matrix
parseHashString         Process a string seperated by hash symbols or a
                        vector (or list) of strings not containing any
                        hash symbols
parseRangeCode          Parse a numerical range expression
performAnalysis         Runs the analysis code against one dataset
readAllData             Read scenario data
readData                Read scenario data
removeDirectories       Remove directories
validNames              Check if a character string is a valid R
                        variable name
writeData               Write scenario data
writeLogFile            Write a job log file
