Microscopy Based Citometry Data Analysis Package

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Documentation for package ‘Rcell’ version 1.1-7

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Rcell-package Cell Data Analysis and Plotting Package
ACL394 Time Dependent Dose Response of Yeast Cells to Mating Pheromone
ACL394filtered Time Dependent Dose Response of Yeast Cells to Mating Pheromone
aggregate.cell.data Compute Summary Statistics of Cell Data Subsets
append.anular.c Append Variables
append.anular.r Append Variables
append.anular.y Append Variables
append.in.focus Append Variables
append.memRec.y Append Variables
append.oif.interval Append Variables from OIF files
append.oif.time Append Variables from OIF files
append.z.scan Append Variables
as.cell.data Coerce to Cell Data
as.cell.data.list Coerce to Cell Data
as.data.frame.cell.data Coerce to a Data Frame
cardinality.plot Map Cell Counter Tags to Cells
cdata Coerce to a Data Frame
cell-counter Map Cell Counter Tags to Cells
cell.counter Map Cell Counter Tags to Cells
cell.hclust Hierarchical Clustering of Cell Data
cell.image Get Cells Images
chclust Hierarchical Clustering of Cell Data
cimage Plot cell images
cimage.cell.data Plot cell images
cimage.cell.image Plot cell images
cimage.default Plot cell images
clayer Plotting Cell Data Objects
clayermean Plotting Cell Data Objects
clayermeans Plotting Cell Data Objects
cnormalize Transform Cell Image
cplot Plotting Cell Data Objects
cplotmean Plotting Cell Data Objects
cplotmeans Plotting Cell Data Objects
creshape Reshape a Cell Data Object
Extract.cell.data Coerce to a Data Frame
get.cell.image Get Cells Images
get.cell.image.cell.data Get Cells Images
get.cell.image.data.frame Get Cells Images
get.cell.image.default Get Cells Images
img.desc Get Cells Images
is.cell.data Coerce to Cell Data
is.cell.image Get Cells Images
load.cell.data Load Cell-ID Data
load.cellID.data Load Cell-ID Data
load.pdata Merge a Data Frame to a Cell Data Object
map.cells.points Map Cell Counter Tags to Cells
merge.cell.data Merge a Data Frame to a Cell Data Object
misc Miscellaneous Functions
OIF Append Variables from OIF files
paste_data_error Miscellaneous Functions
paste_EC50_n Miscellaneous Functions
paste_intercept_slope Miscellaneous Functions
paste_parameter Miscellaneous Functions
pdata Time Dependent Dose Response of Yeast Cells to Mating Pheromone
plot.cell.data Plotting Cell Data Objects
pos1.cell.counter Time Dependent Dose Response of Yeast Cells to Mating Pheromone
print.cell.image Get Cells Images
print.summary.cell.image Get Cells Images
QC.execute Quality Control Filter
QC.filter Quality Control Filter
QC.reset Quality Control Filter
QC.undo Quality Control Filter
Rcell Cell Data Analysis and Plotting Package
remove.vars Subset a Cell Data Objects
reshape Reshape a Cell Data Object
reshape.cell.data Reshape a Cell Data Object
select.cells Select Subset of Cells
select.vars Select Variables
show.image Show a Image
show.img Show a Image
subset.cell.data Subset a Cell Data Objects
summary.cell.data Cell Data Object Summary
summary.cell.image Get Cells Images
transform.by Transform a Cell Data Object
transform.by.cell.data Transform a Cell Data Object
transform.by.data.frame Transform a Cell Data Object
transform.by.default Transform a Cell Data Object
transform.cell.data Transform a Cell Data Object
update.n.tot Calculate Total Number of Frames for Each Cell
vplayout Miscellaneous Functions
with.cell.data Evaluates an Expression in a Cell Data Object.
X Time Dependent Dose Response of Yeast Cells to Mating Pheromone
xzoom Zoom in a ggplot Object
yzoom Zoom in a ggplot Object
zoom Zoom in a ggplot Object
[.cell.data Subset a Cell Data Objects
[[.cell.data Coerce to a Data Frame