* using log directory 'd:/Rcompile/CRANpkg/local/2.13/RSiena.Rcheck'
* using R version 2.13.2 (2011-09-30)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* checking for file 'RSiena/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'RSiena' version '1.0.12.201'
* checking package namespace information ... OK
* checking package dependencies ... NOTE
Package suggested but not available for checking: parallel
* checking if this is a source package ... OK
* checking whether package 'RSiena' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
initializeBayes: no visible global function definition for
  'clusterSetRNGStream'
robmon: no visible global function definition for 'clusterSetRNGStream'
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable compilation flags in Makevars ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking sizes of PDF files under inst/doc ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking for unstated dependencies in tests ... OK
* checking tests ...
** running tests for arch 'i386' OK
  Running 'parallel.R'
  Comparing 'parallel.Rout' to 'parallel.Rout.save' ...5c5
< [1] "201"
---
> [1] NA
  Running 'scripts.R'
  Comparing 'scripts.Rout' to 'scripts.Rout.save' ...4a5
> > if(!nzchar(Sys.getenv("RSIENA_TESTING"))) q("no")
55a57,64
> > 
> > ## now run it
> > res <- 0L
> > runone("scriptfile.R")
>   Running 'scriptfile.R'
> [1] 0
> > 
> > ## now look at the differences
64a74
> > #system("diff scriptfile.Rout scriptfile.Rout.save")
66c76,104
< > if(!nzchar(Sys.getenv("RSIENA_TESTING"))) q("no")
---
> > Rdiff("scriptfile.Rout", previousFile)
> 
> 490c490
> < Packaged:             2012-01-20 15:00:55 UTC; ruth
> ---
> > Packaged:             2012-01-20 14:53:50 UTC; ruth
> 492c492
> <                       15:01:02 UTC; unix
> ---
> >                       14:54:06 UTC; unix
> 2686c2686
> < % Fri Jan 20 15:04:14 2012
> ---
> > % Fri Jan 20 14:57:23 2012
> 2714c2714
> < <!-- Fri Jan 20 15:04:14 2012 -->
> ---
> > <!-- Fri Jan 20 14:57:23 2012 -->
> [1] 1
> > 
> > proc.time()
>    user  system elapsed 
>  86.492   0.276  88.932 
> > 
> > if (res > 0)
> + {
> + 	stop("scripts failed")
> + }
> > 
** running tests for arch 'x64' OK
  Running 'parallel.R'
  Comparing 'parallel.Rout' to 'parallel.Rout.save' ...5c5
< [1] "201"
---
> [1] NA
  Running 'scripts.R'
  Comparing 'scripts.Rout' to 'scripts.Rout.save' ...4a5
> > if(!nzchar(Sys.getenv("RSIENA_TESTING"))) q("no")
55a57,64
> > 
> > ## now run it
> > res <- 0L
> > runone("scriptfile.R")
>   Running 'scriptfile.R'
> [1] 0
> > 
> > ## now look at the differences
64a74
> > #system("diff scriptfile.Rout scriptfile.Rout.save")
66c76,104
< > if(!nzchar(Sys.getenv("RSIENA_TESTING"))) q("no")
---
> > Rdiff("scriptfile.Rout", previousFile)
> 
> 490c490
> < Packaged:             2012-01-20 15:00:55 UTC; ruth
> ---
> > Packaged:             2012-01-20 14:53:50 UTC; ruth
> 492c492
> <                       15:01:02 UTC; unix
> ---
> >                       14:54:06 UTC; unix
> 2686c2686
> < % Fri Jan 20 15:04:14 2012
> ---
> > % Fri Jan 20 14:57:23 2012
> 2714c2714
> < <!-- Fri Jan 20 15:04:14 2012 -->
> ---
> > <!-- Fri Jan 20 14:57:23 2012 -->
> [1] 1
> > 
> > proc.time()
>    user  system elapsed 
>  86.492   0.276  88.932 
> > 
> > if (res > 0)
> + {
> + 	stop("scripts failed")
> + }
> > 
* checking PDF version of manual ... OK