* using log directory 'd:/Rcompile/CRANpkg/local/2.13/adephylo.Rcheck' * using R version 2.13.2 (2011-09-30) * using platform: i386-pc-mingw32 (32-bit) * using session charset: ISO8859-1 * checking for file 'adephylo/DESCRIPTION' ... OK * this is package 'adephylo' version '1.1-2' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'adephylo' can be installed ... ERROR Installation failed. The installation logfile: * installing *source* package 'adephylo' ... ** libs *** arch - i386 make[1]: Entering directory `/cygdrive/d/Rcompile/CRANpkg/local/2.13/adephylo/src-i386' gcc -I"d:/Rcompile/recent/R-2.13.2/include" -I"d:/Rcompile/CRANpkg/extralibs/local/include" -O3 -Wall -std=gnu99 -c adesub.c -o adesub.o gcc -I"d:/Rcompile/recent/R-2.13.2/include" -I"d:/Rcompile/CRANpkg/extralibs/local/include" -O3 -Wall -std=gnu99 -c distPhylo.c -o distPhylo.o gcc -I"d:/Rcompile/recent/R-2.13.2/include" -I"d:/Rcompile/CRANpkg/extralibs/local/include" -O3 -Wall -std=gnu99 -c phylog.c -o phylog.o phylog.c: In function 'MVarianceDecompInOrthoBasis': phylog.c:313:23: warning: unused variable 'zperm' phylog.c:312:28: warning: unused variable 'numero' gcc -I"d:/Rcompile/recent/R-2.13.2/include" -I"d:/Rcompile/CRANpkg/extralibs/local/include" -O3 -Wall -std=gnu99 -c sptips.c -o sptips.o sptips.c: In function 'pathTipToRoot': sptips.c:176:6: warning: unused variable 'i' gcc -shared -s -static-libgcc -o adephylo.dll tmp.def adesub.o distPhylo.o phylog.o sptips.o -Ld:/Rcompile/CRANpkg/extralibs/local/lib -Ld:/Rcompile/recent/R-2.13.2/bin/i386 -lR make[1]: Leaving directory `/cygdrive/d/Rcompile/CRANpkg/local/2.13/adephylo/src-i386' installing to d:/Rcompile/CRANpkg/lib/2.13/adephylo/libs/i386 *** arch - x64 make[1]: Entering directory `/cygdrive/d/Rcompile/CRANpkg/local/2.13/adephylo/src-x64' x86_64-w64-mingw32-gcc -I"d:/Rcompile/recent/R-2.13.2/include" -I"d:/Rcompile/CRANpkg/extralibs64new/local/include" -O2 -Wall -std=gnu99 -c adesub.c -o adesub.o x86_64-w64-mingw32-gcc -I"d:/Rcompile/recent/R-2.13.2/include" -I"d:/Rcompile/CRANpkg/extralibs64new/local/include" -O2 -Wall -std=gnu99 -c distPhylo.c -o distPhylo.o x86_64-w64-mingw32-gcc -I"d:/Rcompile/recent/R-2.13.2/include" -I"d:/Rcompile/CRANpkg/extralibs64new/local/include" -O2 -Wall -std=gnu99 -c phylog.c -o phylog.o phylog.c: In function 'MVarianceDecompInOrthoBasis': phylog.c:313:23: warning: unused variable 'zperm' phylog.c:312:28: warning: unused variable 'numero' x86_64-w64-mingw32-gcc -I"d:/Rcompile/recent/R-2.13.2/include" -I"d:/Rcompile/CRANpkg/extralibs64new/local/include" -O2 -Wall -std=gnu99 -c sptips.c -o sptips.o sptips.c: In function 'pathTipToRoot': sptips.c:176:6: warning: unused variable 'i' x86_64-w64-mingw32-gcc -shared -s -static-libgcc -o adephylo.dll tmp.def adesub.o distPhylo.o phylog.o sptips.o -Ld:/Rcompile/CRANpkg/extralibs64new/local/lib -Ld:/Rcompile/recent/R-2.13.2/bin/x64 -lR make[1]: Leaving directory `/cygdrive/d/Rcompile/CRANpkg/local/2.13/adephylo/src-x64' installing to d:/Rcompile/CRANpkg/lib/2.13/adephylo/libs/x64 ** R ** data ** inst ** preparing package for lazy loading Warning: replacing previous import 'edges' when loading 'ape' Error : package 'ade4' does not have a name space ERROR: lazy loading failed for package 'adephylo' * removing 'd:/Rcompile/CRANpkg/lib/2.13/adephylo' * restoring previous 'd:/Rcompile/CRANpkg/lib/2.13/adephylo'