* using log directory 'd:/Rcompile/CRANpkg/local/2.13/anchors.Rcheck' * using R version 2.13.2 (2011-09-30) * using platform: i386-pc-mingw32 (32-bit) * using session charset: ISO8859-1 * checking for file 'anchors/DESCRIPTION' ... OK * this is package 'anchors' version '3.0-7' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'anchors' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking for portable compilation flags in Makevars ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking sizes of PDF files under inst/doc ... OK * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK * checking for unstated dependencies in tests ... OK * checking tests ... ** running tests for arch 'i386' OK Running 'chopit.R' Comparing 'chopit.Rout' to 'chopit.Rout.save' ...15c15 < ## rgenoud (Version 5.7-3, Build Date: 2011-05-04) --- > ## rgenoud (Version 5.7-1, Build Date: 2010-08-26) 138,144c138,144 < [1] 2.937992e-05 1.535087e-05 1.387568e-03 1.502477e-05 2.537598e-04 < [6] 3.404366e-05 1.620102e-05 1.464629e-03 1.804597e-05 2.864446e-04 < [11] 2.608939e-05 1.412080e-05 1.230193e-03 1.305528e-05 2.330219e-04 < [16] 2.466401e-06 4.791235e-06 1.320844e-04 1.598642e-06 1.507676e-05 < [21] -1.356461e-06 -2.332286e-06 -2.967052e-06 -3.090505e-06 -2.468685e-06 < [26] -8.169709e-06 -8.479027e-06 -4.477244e-06 -3.743376e-06 -2.198868e-06 < [31] -1.378791e-06 -1.098163e-04 -1.155733e-06 -1.999213e-05 --- > [1] 2.937992e-05 1.535086e-05 1.387568e-03 1.502477e-05 2.537598e-04 > [6] 3.404366e-05 1.620102e-05 1.464629e-03 1.804597e-05 2.864445e-04 > [11] 2.608938e-05 1.412080e-05 1.230193e-03 1.305528e-05 2.330219e-04 > [16] 2.466399e-06 4.791235e-06 1.320844e-04 1.598641e-06 1.507675e-05 > [21] -1.356460e-06 -2.332286e-06 -2.967052e-06 -3.090505e-06 -2.468684e-06 > [26] -8.169708e-06 -8.479026e-06 -4.477243e-06 -3.743376e-06 -2.198868e-06 > [31] -1.378791e-06 -1.098162e-04 -1.155733e-06 -1.999213e-05 229,235c229,235 < [1] 2.937992e-05 1.535087e-05 1.387568e-03 1.502477e-05 2.537598e-04 < [6] 3.404366e-05 1.620102e-05 1.464629e-03 1.804597e-05 2.864446e-04 < [11] 2.608939e-05 1.412080e-05 1.230193e-03 1.305528e-05 2.330219e-04 < [16] 2.466401e-06 4.791235e-06 1.320844e-04 1.598642e-06 1.507676e-05 < [21] -1.356461e-06 -2.332286e-06 -2.967052e-06 -3.090505e-06 -2.468685e-06 < [26] -8.169709e-06 -8.479027e-06 -4.477244e-06 -3.743376e-06 -2.198868e-06 < [31] -1.378791e-06 -1.098163e-04 -1.155733e-06 -1.999213e-05 --- > [1] 2.937992e-05 1.535086e-05 1.387568e-03 1.502477e-05 2.537598e-04 > [6] 3.404366e-05 1.620102e-05 1.464629e-03 1.804597e-05 2.864445e-04 > [11] 2.608938e-05 1.412080e-05 1.230193e-03 1.305528e-05 2.330219e-04 > [16] 2.466399e-06 4.791235e-06 1.320844e-04 1.598641e-06 1.507675e-05 > [21] -1.356460e-06 -2.332286e-06 -2.967052e-06 -3.090505e-06 -2.468684e-06 > [26] -8.169708e-06 -8.479026e-06 -4.477243e-06 -3.743376e-06 -2.198868e-06 > [31] -1.378791e-06 -1.098162e-04 -1.155733e-06 -1.999213e-05 Running 'unit.anchors.R' Comparing 'unit.anchors.Rout' to 'unit.anchors.Rout.save' ...12c12 < ## rgenoud (Version 5.7-3, Build Date: 2011-05-04) --- > ## rgenoud (Version 5.7-1, Build Date: 2010-08-26) Running 'unit.cpolr.R' Comparing 'unit.cpolr.Rout' to 'unit.cpolr.Rout.save' ...4c4 < ## rgenoud (Version 5.7-3, Build Date: 2011-05-04) --- > ## rgenoud (Version 5.7-1, Build Date: 2010-08-26) ** running tests for arch 'x64' OK Running 'chopit.R' Comparing 'chopit.Rout' to 'chopit.Rout.save' ...15c15 < ## rgenoud (Version 5.7-3, Build Date: 2011-05-04) --- > ## rgenoud (Version 5.7-1, Build Date: 2010-08-26) 138,144c138,144 < [1] -7.415851e-06 -1.677572e-07 -3.670233e-04 -1.862969e-06 -4.725732e-05 < [6] -6.588366e-06 1.721556e-07 -5.720255e-04 -3.438019e-07 -8.469456e-05 < [11] -1.594314e-05 -4.693868e-06 -6.031412e-04 -7.622795e-06 -1.687755e-04 < [16] 1.264617e-05 1.030541e-05 5.392058e-04 8.141348e-06 1.151841e-04 < [21] 2.212320e-06 -1.202210e-06 -1.791365e-06 4.844182e-07 1.027575e-06 < [26] 4.694527e-06 1.172531e-07 1.182980e-06 5.862395e-07 1.045204e-06 < [31] 5.477941e-08 2.029936e-05 -5.970335e-07 -1.066868e-05 --- > [1] 2.937992e-05 1.535086e-05 1.387568e-03 1.502477e-05 2.537598e-04 > [6] 3.404366e-05 1.620102e-05 1.464629e-03 1.804597e-05 2.864445e-04 > [11] 2.608938e-05 1.412080e-05 1.230193e-03 1.305528e-05 2.330219e-04 > [16] 2.466399e-06 4.791235e-06 1.320844e-04 1.598641e-06 1.507675e-05 > [21] -1.356460e-06 -2.332286e-06 -2.967052e-06 -3.090505e-06 -2.468684e-06 > [26] -8.169708e-06 -8.479026e-06 -4.477243e-06 -3.743376e-06 -2.198868e-06 > [31] -1.378791e-06 -1.098162e-04 -1.155733e-06 -1.999213e-05 229,235c229,235 < [1] -7.415851e-06 -1.677572e-07 -3.670233e-04 -1.862969e-06 -4.725732e-05 < [6] -6.588366e-06 1.721556e-07 -5.720255e-04 -3.438019e-07 -8.469456e-05 < [11] -1.594314e-05 -4.693868e-06 -6.031412e-04 -7.622795e-06 -1.687755e-04 < [16] 1.264617e-05 1.030541e-05 5.392058e-04 8.141348e-06 1.151841e-04 < [21] 2.212320e-06 -1.202210e-06 -1.791365e-06 4.844182e-07 1.027575e-06 < [26] 4.694527e-06 1.172531e-07 1.182980e-06 5.862395e-07 1.045204e-06 < [31] 5.477941e-08 2.029936e-05 -5.970335e-07 -1.066868e-05 --- > [1] 2.937992e-05 1.535086e-05 1.387568e-03 1.502477e-05 2.537598e-04 > [6] 3.404366e-05 1.620102e-05 1.464629e-03 1.804597e-05 2.864445e-04 > [11] 2.608938e-05 1.412080e-05 1.230193e-03 1.305528e-05 2.330219e-04 > [16] 2.466399e-06 4.791235e-06 1.320844e-04 1.598641e-06 1.507675e-05 > [21] -1.356460e-06 -2.332286e-06 -2.967052e-06 -3.090505e-06 -2.468684e-06 > [26] -8.169708e-06 -8.479026e-06 -4.477243e-06 -3.743376e-06 -2.198868e-06 > [31] -1.378791e-06 -1.098162e-04 -1.155733e-06 -1.999213e-05 Running 'unit.anchors.R' Comparing 'unit.anchors.Rout' to 'unit.anchors.Rout.save' ...12c12 < ## rgenoud (Version 5.7-3, Build Date: 2011-05-04) --- > ## rgenoud (Version 5.7-1, Build Date: 2010-08-26) Running 'unit.cpolr.R' Comparing 'unit.cpolr.Rout' to 'unit.cpolr.Rout.save' ...4c4 < ## rgenoud (Version 5.7-3, Build Date: 2011-05-04) --- > ## rgenoud (Version 5.7-1, Build Date: 2010-08-26) * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... OK * checking re-building of vignettes ... OK * checking PDF version of manual ... OK