* using log directory 'd:/Rcompile/CRANpkg/local/2.13/chemometrics.Rcheck' * using R version 2.13.2 (2011-09-30) * using platform: i386-pc-mingw32 (32-bit) * using session charset: ISO8859-1 * checking for file 'chemometrics/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'chemometrics' version '1.3.8' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'chemometrics' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking sizes of PDF files under inst/doc ... OK * checking examples ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... OK * checking re-building of vignettes ... NOTE Error in re-building vignettes: ... Loading required package: lars Loading required package: MASS Loading required package: mclust by using mclust, invoked on its own or through another package, you accept the license agreement in the mclust LICENSE file and at http://www.stat.washington.edu/mclust/license.txt Loading required package: nnet Loading required package: pcaPP Loading required package: mvtnorm Loading required package: pls Attaching package: 'pls' The following object(s) are masked from 'package:stats': loadings Loading required package: rpart Loading required package: robustbase Loading required package: som Error: processing vignette 'chemometrics-vignette.rnw' failed with diagnostics: cannot open file 'Figures/Fig-02-01-pcaCV.pdf' Execution halted * checking PDF version of manual ... OK