* using log directory 'd:/Rcompile/CRANpkg/local/2.13/maxstat.Rcheck' * using R version 2.13.2 (2011-09-30) * using platform: i386-pc-mingw32 (32-bit) * using session charset: ISO8859-1 * checking for file 'maxstat/DESCRIPTION' ... OK * this is package 'maxstat' version '0.7-14' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'maxstat' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking sizes of PDF files under inst/doc ... OK * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK * checking for unstated dependencies in tests ... OK * checking tests ... ** running tests for arch 'i386' OK Running 'maxstat-Ex.R' Comparing 'maxstat-Ex.Rout' to 'maxstat-Ex.Rout.save' ...33,35d32 < Package 'exactRankTests' is no longer under development. < Please consider using package 'coin' instead. < 143c140 < M = 3.171, p-value = 0.01927 --- > M = 3.171, p-value = 0.01669 147a145,146 > Warning message: > Completion with error > abseps in: pexactgauss(STATISTIC, x, minprop, maxprop, ...) 157c156 < M = 3.1772, p-value = 0.0111 --- > M = 3.1772, p-value = 0.01130 364c363 < M = 3.5691, p-value = 0.004542 --- > M = 3.5691, p-value = 0.002932 370,371c369 < In pexactgauss(STATISTIC, x, minprop, maxprop, ...) : < Completion with error > abseps --- > Completion with error > abseps in: pexactgauss(STATISTIC, x, minprop, maxprop, ...) 379c377 < M = 3.5639, p-value = 0.004766 --- > M = 3.5639, p-value = 0.004902 383a382,383 > Warning message: > Completion with error > abseps in: pexactgauss(STATISTIC, x, minprop, maxprop, ...) 439a440,442 > Warning messages: > 1: Completion with error > abseps in: pexactgauss(STATISTIC, x, minprop, maxprop, ...) > 2: pvmnorm: Completion with error > abseps in: maxstat(y = c(77.4, 3.4, 71.3, 69.6, 51.2, 3.2, 8.3, 102.4, 89.8, 459c462 < > load(file.path(system.file(package = "maxstat"), "results", "LausenTab2.rda")) --- > > data(LausenTab2) 644c647 < M = 2.4033, p-value = 0.159 --- > M = 2.4033, p-value = 0.1590 Running 'maxstat-bugs.R' Comparing 'maxstat-bugs.Rout' to 'maxstat-bugs.Rout.save' ...5,7d4 < Package 'exactRankTests' is no longer under development. < Please consider using package 'coin' instead. < ** running tests for arch 'x64' OK Running 'maxstat-Ex.R' Comparing 'maxstat-Ex.Rout' to 'maxstat-Ex.Rout.save' ...33,35d32 < Package 'exactRankTests' is no longer under development. < Please consider using package 'coin' instead. < 143c140 < M = 3.171, p-value = 0.01893 --- > M = 3.171, p-value = 0.01669 147a145,146 > Warning message: > Completion with error > abseps in: pexactgauss(STATISTIC, x, minprop, maxprop, ...) 157c156 < M = 3.1772, p-value = 0.0111 --- > M = 3.1772, p-value = 0.01130 364c363 < M = 3.5691, p-value = 0.00452 --- > M = 3.5691, p-value = 0.002932 370,371c369 < In pexactgauss(STATISTIC, x, minprop, maxprop, ...) : < Completion with error > abseps --- > Completion with error > abseps in: pexactgauss(STATISTIC, x, minprop, maxprop, ...) 379c377 < M = 3.5639, p-value = 0.004766 --- > M = 3.5639, p-value = 0.004902 383a382,383 > Warning message: > Completion with error > abseps in: pexactgauss(STATISTIC, x, minprop, maxprop, ...) 439a440,442 > Warning messages: > 1: Completion with error > abseps in: pexactgauss(STATISTIC, x, minprop, maxprop, ...) > 2: pvmnorm: Completion with error > abseps in: maxstat(y = c(77.4, 3.4, 71.3, 69.6, 51.2, 3.2, 8.3, 102.4, 89.8, 459c462 < > load(file.path(system.file(package = "maxstat"), "results", "LausenTab2.rda")) --- > > data(LausenTab2) 644c647 < M = 2.4033, p-value = 0.159 --- > M = 2.4033, p-value = 0.1590 Running 'maxstat-bugs.R' Comparing 'maxstat-bugs.Rout' to 'maxstat-bugs.Rout.save' ...5,7d4 < Package 'exactRankTests' is no longer under development. < Please consider using package 'coin' instead. < * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... OK * checking re-building of vignettes ... OK * checking PDF version of manual ... OK