* using log directory 'd:/Rcompile/CRANpkg/local/2.13/oro.nifti.Rcheck'
* using R version 2.13.2 (2011-09-30)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* checking for file 'oro.nifti/DESCRIPTION' ... OK
* this is package 'oro.nifti' version '0.3.1'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'oro.nifti' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking sizes of PDF files under inst/doc ... OK
* checking examples ... OK
* checking differences from 'oro.nifti-Ex.Rout' to 'oro.nifti-Ex.Rout.save' ...
3c3
< oro.nifti: Rigorous - NIfTI+ANALYZE+AFNI Input / Output (version = 0.3.1)
---
> oro.nifti: Rigorous - NIfTI+ANALYZE+AFNI Input / Output (version = 0.2.7)
306,337d305
< > nameEx("calmin-methods")
< > ### * calmin-methods
< > 
< > flush(stderr()); flush(stdout())
< > 
< > ### Name: cal.min-methods
< > ### Title: Extract or Replace NIfTI/Analyze Min or Max Values
< > ### Aliases: cal.min-methods cal.min,anlz-method cal.min,nifti-method
< > ###   cal.min<-,anlz-method cal.min<-,nifti-method cal.min cal.min<-
< > ###   cal.max-methods cal.max,anlz-method cal.max,nifti-method
< > ###   cal.max<-,anlz-method cal.max<-,nifti-method cal.max cal.max<-
< > ### Keywords: methods
< > 
< > ### ** Examples
< > 
< > ## Not run: 
< > ##D url <- "http://nifti.nimh.nih.gov/nifti-1/data/avg152T1_LR_nifti.nii.gz"
< > ##D urlfile <- file.path(system.file("nifti", package="oro.nifti"),
< > ##D                      "mniLR.nii.gz")
< > ##D download.file(url, urlfile, quiet=TRUE)
< > ## End(Not run)
< > urlfile <- file.path(system.file("nifti", package="oro.nifti"),
< +                      "mniLR.nii.gz")
< > mniLR <- readNIfTI(urlfile)
< > cal.min(mniLR)
< [1] 0
< > cal.max(mniLR)
< [1] 255
< > 
< > 
< > 
< > cleanEx()
456c424
< [1] "FSL3.2beta; R version 2.13.2 (2011-09-30)"
---
> [1] "FSL3.2beta; R version 2.13.0 (2011-04-13)"
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... OK
* checking re-building of vignettes ... OK
* checking PDF version of manual ... OK