E.coli_iAF1260          Ecoli dataset with ORFs and thermodynamic
                        information
E.coli_iJR904           Ecoli genome-scale model
Glycolysis              Metabolic reconstruction of Glycolysis pathway
H.pylori_ilT341         H.pylori in silico genome-scale
                        characterization of single and double deletion
                        mutants
H.sapiens_Recon_1       Human metabolic reconstruction
M.barkeri_iAF692        Metabolic reconstruction of M.barkeri
S.aureus_iSB619         Metabolic reconstruction of S.aureus
S.cerevisiae_iND750     Metabolic reconstruction of S.cerevisiae
addReact2StoM           adds a user defined reaction to stoichiometric
                        matrix
attachMetAbbre          Attaches abbreviation prefix "M_" for the
                        metabolite identifiers
attachReactAbbre        Attaches abbreviation prefix "R_" for the
                        reaction identifiers
createBiggModel         createBiggModel
getAdjMfromStoM         getAdjMfromStoM
getEdgeWidths           getEdgeWidths
getFluxGraph            Gets graphical representation of a flux
                        distribution
getRates                Get Optimized Rates
getSMfromModel          Get stochiometric matrix from the model file
getStoichiometricMatrix
                        Get entire stoichiometric matrix from the
                        metabolic reconstruction for a specific
                        organism exported in SBML format
gnel                    Example graphnel object of Glycolysis pathway
model2hyperdraw         Draws a hypergraph representation from a model
                        file
possibleExternals       possibleExternals
pruneBiggModel          pruneBiggModel
rmvReactFromStoM        removes a reaction from the stoichiometric
                        matrix
