AlleleCum               Plots a cumulative allele size distribution
AlleleHist              Plots an histogram of microsatellite fragment
                        sizes
BinStat                 Summary bin statistics
DBZn                    A data base of the type used by this package
                        with Zostera noltii data
DBase                   A data base of the type used by this package
InputFile               A data matrix similar to the tab delimited text
                        file such as needed to data input
MsatAllele-package      Visualizes and scores microsatellite alleles
                        from electrophoresis fragment sizes
OrderByLocus            A function to order the fragment size vector
                        for a given locus
STRandOUT               A table like the one exported in the Strand .ah
                        file
bin.limits              Writes the limits of bin classes and rounded
                        bin codes
get.allele              Gets the allele code from an electrophoresis
                        fragment size
getpoints               Interacts with AlleleCum graph to list
                        observations
mark.bins               Adds bin limits to histograms of fragment size
                        distribution
read.ah.file            Reads .ah files from Strand and creates a R
                        data base
read.frag.sizes         Reads tab delimited text files with input
                        fragment sizes creates a R data base
restrict.hist           Plots an histogram of a restricted range of
                        microsatellite fragment sizes
subdataBase             Sorts the data base for a given locus and a
                        restricted range
transDB                 Creates a data base object in the form used by
                        other functions in the package
write.PG.file.all       Writes a file with the bin codes with one
                        column per allele
write.PG.file.loc       Writes a file with the bin codes with one
                        column per locus
