# Spartan (Simulation Parameter Analysis R Toolkit ApplicatioN)

## Documentation for package ‘spartan’ version 1.2

- DESCRIPTION file.

## Help Pages

aa_analyse_all_sample_sizes | Technique 1: Aleatory Analysis
aa_analyse_all_sample_sizes_overTime | Aleatory Analysis At Multiple Timepoints
AA_Example_ATestMaxAndMedians | Utility: Sample Data
aa_getATestResults | Internal Functions
aa_graphATestsForSampleSize | Internal Functions
aa_graphSampleSizeSummary | Technique 1: Aleatory Analysis
aa_graphSampleSizeSummary_overTime | Aleatory Analysis At Multiple Timepoints
aa_sampleSizeSummary | Technique 1: Aleatory Analysis
aa_sampleSizeSummary_overTime | Aleatory Analysis At Multiple Timepoints
atest | Internal Functions
Curve1_chemoLowerLinearAdjust | Utility: Sample Data
Curve1_chemoThreshold | Utility: Sample Data
Curve1_chemoUpperLinearAdjust | Utility: Sample Data
Curve1_Dummy | Utility: Sample Data
Curve1_maxVCAMeffectProbabilityCutoff | Utility: Sample Data
Curve1_thresholdBindProbability | Utility: Sample Data
Curve1_vcamSlope | Utility: Sample Data
efast_cvmethod | Internal Functions
efast_generate_medians_for_all_parameter_subsets | eFAST: Perform Analysis of Results
efast_generate_medians_for_all_parameter_subsets_overTime | eFAST: Perform Analysis of Results at Multiple Timepoints
efast_generate_sample | eFAST
efast_get_overall_medians | eFAST: Perform Analysis of Results
efast_get_overall_medians_overTime | eFAST: Perform Analysis of Results at Multiple Timepoints
efast_graph_Results | Internal Functions
efast_parameterdist | Internal Functions
efast_run_Analysis | eFAST: Perform Analysis of Results
efast_run_Analysis_overTime | eFAST: Perform Analysis of Results at Multiple Timepoints
efast_sd | Internal Functions
efast_setfreq | Internal Functions
efast_ttest | Internal Functions
EgSet_eFAST_AllResults | Utility: Sample Data
EgSet_eFAST_Analysis | Utility: Sample Data
EgSet_LHC_corCoeffs | Utility: Sample Data
EgSet_LHC_Summary | Utility: Sample Data
getMediansSubset | Generate Medians Subset (getMediansSubset)
lhc_constructCoEffDataSet | Internal Functions
lhc_generateLHCSummary | LHC: Perform Analysis of Results
lhc_generateLHCSummary_overTime | LHC: Perform Analysis of Results at Multiple Timepoints
lhc_generatePRCoEffs | LHC: Perform Analysis of Results
lhc_generatePRCoEffs_overTime | LHC: Perform Analysis of Results at Multiple Timepoints
lhc_generate_lhc_sample | LHC
lhc_graphMeasuresForParameterChange | LHC: Perform Analysis of Results
lhc_graphMeasuresForParameterChange_overTime | LHC: Perform Analysis of Results at Multiple Timepoints
LHC_Parameters_for_Runs | Utility: Sample Data
lhc_process_sample_run_subsets | LHC: Perform Analysis of Results
lhc_process_sample_run_subsets_overTime | LHC: Perform Analysis of Results at Multiple Timepoints
normaliseATest | Internal Functions
oat_analyseAllParams | One-At-A-Time - Perform Analysis of Results
oat_analyseAllParams_overTime | One-At-A-Time - Perform Analysis of Results at Multiple Timepoints
OAT_Example_ATests_chemoLowerLinearAdjust | Utility: Sample Data
oat_graphATestsForSampleSize | One-At-A-Time - Perform Analysis of Results
oat_graphATestsForSampleSize_overTime | One-At-A-Time - Perform Analysis of Results at Multiple Timepoints
oat_parameter_sampling | Technique 2: One-At-A-Time - Generate Parameter Value Sets
oat_plotResultDistribution | One-At-A-Time - Perform Analysis of Results
oat_plotResultDistribution_overTime | One-At-A-Time - Perform Analysis of Results at Multiple Timepoints
oat_processParamSubsets | One-At-A-Time - Perform Analysis of Results
oat_processParamSubsets_overTime | One-At-A-Time - Perform Analysis of Results at Multiple Timepoints
OAT_Sampling_chemoThreshold_Values | Utility: Sample Data
OAT_Sampling_maxVCAMeffectProbabilityCutoff_Values | Utility: Sample Data
pcor.mat | Internal Functions
pcor.rec | Internal Functions
pcor.test | Internal Functions
testP-internal | Internal Functions