Spartan (Simulation Parameter Analysis R Toolkit ApplicatioN)

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Documentation for package ‘spartan’ version 1.2

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aa_analyse_all_sample_sizes Technique 1: Aleatory Analysis
aa_analyse_all_sample_sizes_overTime Aleatory Analysis At Multiple Timepoints
AA_Example_ATestMaxAndMedians Utility: Sample Data
aa_getATestResults Internal Functions
aa_graphATestsForSampleSize Internal Functions
aa_graphSampleSizeSummary Technique 1: Aleatory Analysis
aa_graphSampleSizeSummary_overTime Aleatory Analysis At Multiple Timepoints
aa_sampleSizeSummary Technique 1: Aleatory Analysis
aa_sampleSizeSummary_overTime Aleatory Analysis At Multiple Timepoints
atest Internal Functions
Curve1_chemoLowerLinearAdjust Utility: Sample Data
Curve1_chemoThreshold Utility: Sample Data
Curve1_chemoUpperLinearAdjust Utility: Sample Data
Curve1_Dummy Utility: Sample Data
Curve1_maxVCAMeffectProbabilityCutoff Utility: Sample Data
Curve1_thresholdBindProbability Utility: Sample Data
Curve1_vcamSlope Utility: Sample Data
efast_cvmethod Internal Functions
efast_generate_medians_for_all_parameter_subsets eFAST: Perform Analysis of Results
efast_generate_medians_for_all_parameter_subsets_overTime eFAST: Perform Analysis of Results at Multiple Timepoints
efast_generate_sample eFAST
efast_get_overall_medians eFAST: Perform Analysis of Results
efast_get_overall_medians_overTime eFAST: Perform Analysis of Results at Multiple Timepoints
efast_graph_Results Internal Functions
efast_parameterdist Internal Functions
efast_run_Analysis eFAST: Perform Analysis of Results
efast_run_Analysis_overTime eFAST: Perform Analysis of Results at Multiple Timepoints
efast_sd Internal Functions
efast_setfreq Internal Functions
efast_ttest Internal Functions
EgSet_eFAST_AllResults Utility: Sample Data
EgSet_eFAST_Analysis Utility: Sample Data
EgSet_LHC_corCoeffs Utility: Sample Data
EgSet_LHC_Summary Utility: Sample Data
getMediansSubset Generate Medians Subset (getMediansSubset)
lhc_constructCoEffDataSet Internal Functions
lhc_generateLHCSummary LHC: Perform Analysis of Results
lhc_generateLHCSummary_overTime LHC: Perform Analysis of Results at Multiple Timepoints
lhc_generatePRCoEffs LHC: Perform Analysis of Results
lhc_generatePRCoEffs_overTime LHC: Perform Analysis of Results at Multiple Timepoints
lhc_generate_lhc_sample LHC
lhc_graphMeasuresForParameterChange LHC: Perform Analysis of Results
lhc_graphMeasuresForParameterChange_overTime LHC: Perform Analysis of Results at Multiple Timepoints
LHC_Parameters_for_Runs Utility: Sample Data
lhc_process_sample_run_subsets LHC: Perform Analysis of Results
lhc_process_sample_run_subsets_overTime LHC: Perform Analysis of Results at Multiple Timepoints
normaliseATest Internal Functions
oat_analyseAllParams One-At-A-Time - Perform Analysis of Results
oat_analyseAllParams_overTime One-At-A-Time - Perform Analysis of Results at Multiple Timepoints
OAT_Example_ATests_chemoLowerLinearAdjust Utility: Sample Data
oat_graphATestsForSampleSize One-At-A-Time - Perform Analysis of Results
oat_graphATestsForSampleSize_overTime One-At-A-Time - Perform Analysis of Results at Multiple Timepoints
oat_parameter_sampling Technique 2: One-At-A-Time - Generate Parameter Value Sets
oat_plotResultDistribution One-At-A-Time - Perform Analysis of Results
oat_plotResultDistribution_overTime One-At-A-Time - Perform Analysis of Results at Multiple Timepoints
oat_processParamSubsets One-At-A-Time - Perform Analysis of Results
oat_processParamSubsets_overTime One-At-A-Time - Perform Analysis of Results at Multiple Timepoints
OAT_Sampling_chemoThreshold_Values Utility: Sample Data
OAT_Sampling_maxVCAMeffectProbabilityCutoff_Values Utility: Sample Data
pcor.mat Internal Functions
pcor.rec Internal Functions
pcor.test Internal Functions
testP-internal Internal Functions