beetles                 Beetle occurrence data from (Ulrich and
                        Zalewski 2006).
cooccur                 A function to calculate pairwise co-occurrence
                        patterns from a community dataset
cooccur-package         cooccur: Probabilistic Species Co-occurrence
                        Analysis in R
coprob                  Internal function, not intended for use by the
                        user.
coprobbase              Internal function, not intended for use by the
                        user.
effect.sizes            Function to extract species pairwise effect
                        sizes from an object of class 'cooccur'.
finches                 Finch occurrence data from (Sanderson 2000).
obs.v.exp               Function to plot a visualization of the
                        observed versus expected oc-occurrences from an
                        analysis stored in a 'coccurr' object.
pair                    Function to examine co-occurrence patterns for
                        an individual species.
pair.attributes         Function to create a species-wise summary of
                        co-occurrence patterns.
pair.profile            Function to produce a visualization of species
                        contributions to co-occurrence patterns.
plot.cooccur            Function for producing a heatmap co-occurrence
                        visualization.
print.cooccur           Print significant pairwise species results.
prob.table              Function to extract the probability table from
                        an analysis of species co-occurrence.
rodents                 Rodent occurrence data from (Brown and Kurzius
                        1987).
summary.cooccur         Method to summarize co-occurrence patterns.
