Entry: C1
Aliases: C1
Keywords: array
Description: Matrix of distances from D1 to D2
URL: ../../../library/calibrator/html/C1.html

Entry: D1.fun
Aliases: D1.fun
Keywords: array
Description: Function to join x.star to t.vec to give matrix D2
URL: ../../../library/calibrator/html/D1.fun.html

Entry: D2.fun
Aliases: D2.fun
Keywords: array
Description: Augments observation points with parameters
URL: ../../../library/calibrator/html/D2.fun.html

Entry: E.theta.toy
Aliases: E.theta.toy Edash.theta.toy
Keywords: array
Description: Expectation and variance with respect to theta
URL: ../../../library/calibrator/html/E.theta.toy.html

Entry: EK.eqn10.supp
Aliases: EK.eqn10.supp
Keywords: array
Description: Posterior mean of K
URL: ../../../library/calibrator/html/EK.eqn10.supp.html

Entry: Ez.eqn7.supp
Aliases: Ez.eqn7.supp
Keywords: array
Description: Expectation of z given y, beta2, phi
URL: ../../../library/calibrator/html/Ez.eqn7.supp.html

Entry: Ez.eqn9.supp
Aliases: Ez.eqn9.supp Ez.eqn9.supp.vector
Keywords: array
Description: Expectation as per equation 10 of KOH2001
URL: ../../../library/calibrator/html/Ez.eqn9.supp.html

Entry: H.fun
Aliases: H.fun
Keywords: array
Description: H function
URL: ../../../library/calibrator/html/H.fun.html

Entry: H1.toy
Aliases: H1.toy H2.toy
Keywords: array
Description: Basis functions for D1 and D2
URL: ../../../library/calibrator/html/H1.toy.html

Entry: V.fun
Aliases: V.fun
Keywords: array
Description: Variance matrix for observations
URL: ../../../library/calibrator/html/V.fun.html

Entry: V1
Aliases: V1
Keywords: array
Description: Distance matrix
URL: ../../../library/calibrator/html/V1.html

Entry: V2
Aliases: V2
Keywords: array
Description: distance between observation points
URL: ../../../library/calibrator/html/V2.html

Entry: Vd
Aliases: Vd
Keywords: array
Description: Variance matrix for d
URL: ../../../library/calibrator/html/Vd.html

Entry: W
Aliases: W
Keywords: array
Description: covariance matrix for beta
URL: ../../../library/calibrator/html/W.html

Entry: W1
Aliases: W1
Keywords: array
Description: Variance matrix for beta1hat
URL: ../../../library/calibrator/html/W1.html

Entry: W2
Aliases: W2
Keywords: array
Description: variance matrix for beta2
URL: ../../../library/calibrator/html/W2.html

Entry: beta1hat.fun
Aliases: beta1hat.fun
Keywords: array
Description: beta1 estimator
URL: ../../../library/calibrator/html/beta1hat.fun.html

Entry: beta2hat.fun
Aliases: beta2hat.fun
Keywords: array
Description: estimator for beta2
URL: ../../../library/calibrator/html/beta2hat.fun.html

Entry: betahat.fun.koh
Aliases: betahat.fun.koh betahat.fun.koh.vector
Keywords: array
Description: Expectation of beta, given theta, phi and d
URL: ../../../library/calibrator/html/betahat.fun.koh.html

Entry: blockdiag
Aliases: blockdiag
Keywords: array
Description: Assembles matrices blockwise into a block diagonal matrix
URL: ../../../library/calibrator/html/blockdiag.html

Entry: cov.p5.supp
Aliases: cov.p5.supp
Keywords: array
Description: Covariance function for posterior distribution of z
URL: ../../../library/calibrator/html/cov.p5.supp.html

Entry: create.new.toy.datasets
Aliases: create.new.toy.datasets
Keywords: datasets
Description: Create new toy datasets
URL: ../../../library/calibrator/html/create.new.toy.datasets.html

Entry: dists.2frames
Aliases: dists.2frames
Keywords: array
Description: Distance between two points
URL: ../../../library/calibrator/html/dists.2frames.html

Entry: etahat
Aliases: etahat
Keywords: array
Description: Expectation of computer output
URL: ../../../library/calibrator/html/etahat.html

Entry: extractor.toy
Aliases: extractor.toy
Keywords: array
Description: Extracts lat/long matrix and theta matrix from D2.
URL: ../../../library/calibrator/html/extractor.toy.html

Entry: h1.toy
Aliases: h1.toy h2.toy
Keywords: array
Description: Basis functions
URL: ../../../library/calibrator/html/h1.html

Entry: hbar.fun.toy
Aliases: hbar.fun.toy
Keywords: array
Description: Toy example of hbar (section 4.2)
URL: ../../../library/calibrator/html/hbar.fun.toy.html

Entry: is.positive.definite
Aliases: is.positive.definite
Keywords: array
Description: Is a matrix positive definite?
URL: ../../../library/calibrator/html/is.positive.definite.html

Entry: p.eqn4.supp
Aliases: p.eqn4.supp p.equationn4.supp
Keywords: array
Description: Apostiori probability of psi1
URL: ../../../library/calibrator/html/p.eqn4.supp.html

Entry: p.eqn8.supp
Aliases: p.eqn8.supp p.eqn8.supp.vector
Keywords: array
Description: A postiori probability of hyperparameters
URL: ../../../library/calibrator/html/p.eqn8.supp.html

Entry: p.page4
Aliases: p.page4
Keywords: array
Description: A postiori probability of hyperparameters
URL: ../../../library/calibrator/html/p.page4.html

Entry: phi.fun.toy
Aliases: phi.fun.toy phi.change
Keywords: array
Description: Functions to create or change hyperparameters
URL: ../../../library/calibrator/html/phi.fun.toy.html

Entry: prob.psi1
Aliases: prob.psi1 prob.psi2 prob.theta sample.theta
Keywords: array
Description: A priori probability of psi1, psi2, and theta
URL: ../../../library/calibrator/html/prob.psi1.html

Entry: reality
Aliases: reality computer.model model.inadequacy phi.true.toy phi.true
Keywords: array
Description: Reality
URL: ../../../library/calibrator/html/reality.html

Entry: stage1
Aliases: stage1 stage2 stage3
Keywords: array
Description: Stage 1,2 and 3 optimization on toy dataset
URL: ../../../library/calibrator/html/stage1.html

Entry: symmetrize
Aliases: symmetrize
Keywords: array
Description: Symmetrize an upper triangular matrix
URL: ../../../library/calibrator/html/symmetrize.html

Entry: tee
Aliases: tee
Keywords: array
Description: tee: distances to a point
URL: ../../../library/calibrator/html/tee.html

Entry: toys
Aliases: D1.toy D2.toy d.toy phi.toy theta.toy t.vec.toy toys x.toy x.toy2 x.vec y.toy z.toy V.toy X.dist.toy
Keywords: datasets
Description: Toy datasets
URL: ../../../library/calibrator/html/toys.html

Entry: tr
Aliases: tr
Keywords: array
Description: Trace of a matrix
URL: ../../../library/calibrator/html/tr.html

Entry: tt.fun
Aliases: tt.fun ht.fun hh.fun t.fun
Keywords: array
Description: Integrals needed in KOH2001
URL: ../../../library/calibrator/html/tt.fun.html
