CTFS.abundance          Overview of Analysis of Abundance and Rate of
                        Change in Population Size in Tropical Tree
                        Populations
CTFS.basalarea          Overview of Analysis of the Change in Basal
                        Area of Tropical Tree Populations
CTFS.biomass            Overview of Analysis of the Biomass Dynamics of
                        Tropical Tree Populations
CTFS.datafiles          Overview of Data File Structure for CTFS
                        Package
CTFS.densdepend         Counting Neighbors and their Attributes -
                        Investigating Density Dependence
CTFS.diversity          Analysis of the number of Species, Genera, and
                        Families in Samples of the Plot
CTFS.groupcats          Overview of Functions that Create Categories
                        for Grouping Trees
CTFS.growth             Overview of Analysis of Growth Rates in
                        Tropical Tree Populations
CTFS.main               Center for Tropical Forest Science (CTFS) :
                        Analysis of Long Term Forest Plot of Large Size
CTFS.manual             CTFS Manuals : Overview
CTFS.maps               Making Maps of Tree Positions, Topography and
                        Area Characteristics
CTFS.mortality          Overview of Analysis of Mortality Rates in
                        Tropical Tree Populations
CTFS.quadfunctions      Overview of Functions that provide Information
                        on the location of trees in a Plot
CTFS.readwrite          Overview of Functions that Read, Write and
                        Restructure CTFS data files
CTFS.recruitment        Overview of Analysis of Recruitment Rates in
                        Tropical Tree Populations
CTFS.utilities          Overview of Functions that are CTFS Utilities
abund.ch.prob           Calculation of Probability of Change in
                        Population size
abundance               Abundance of Trees by Categories (User Defined
                        Groups)
abundance.change        Annual Change in Population Size by Categories
                        (User Defined Groups
abundance.change.calculation
                        Calculation of Annual Change in Population Size
                        and Probability that Population Size has
                        Changed
abundance.change.dbh    Annual Change in Population Size by DBH
abundance.quad          Abundance of Trees by Species and User Defined
                        Quadrates
abundance.spp           Abundance of Trees by Species and DBH Classes
agb.ind                 Computes Above Growth Biomass for Individual
                        Tree
assemble.demography     Reformat the Output from Demographic Functions
                        from List to Dataframe
assemble.table.each     Reformat the Output from Demographic Functions
                        from List to Dataframe
ba                      Basal Area of Trees
ba.change               Annual Change in Basal Area by Categories (User
                        Defined Group)
ba.indiv                Basal Area of Individual Trees, including
                        Mulitiple Stems
badgrowth.tree          Identify Trees for which DBH was Estimated for
                        Biomass Calculation
basal.area              Basal Area by Categories (User defined groups)
bcielev.info            Dataset of elevation for 5 x 5 m points in the
                        BCI CTFS Plot
bciquad.info            Dataset of Information for each 20 by 20 m
                        quadrate in the BCI 50 ha plot
bcispp.info             Dataset of Information on each Species found in
                        the BCI 50 HA plot
bcitopo.info            Topographic Data for CTFS Plot : Elevation,
                        Convexity and Slope
biomass                 Compute Above Ground Biomass for Trees for 2
                        Censuses using Wood Specific Gravity for
                        Species
biomass.change          Biomass Dynamics
convert.ba.mult         Compute Basal Area for All Stems of an
                        Individual Tree using Census Dataset and
                        Multi-Stem Dataset
create.status           Create STATUS variable for CTFS Datasets
elev.to.list            Converts a Dataframe of Elevation Values to a
                        Matrix
find.climits            Computes 95\% CI for a Survivorship
findborderquads         Returns Indices of Neighboring Quadrats Given a
                        Quadrat Index
gr.raw                  Unadjusted, Untrimmed Annual DBH Increment for
                        Individual Trees
growth                  Annual Growth Rates by Categories (User defined
                        groups)
growth.dbh              Annual Growth Rate for DBH Classes
growth.eachspp          Annual Growth Rate for Species by DBH Class
growth.indiv            Annual Growth Rates for Individual Trees (3
                        methods of growth rate computation provided)
gxgy.to.hectindex       Converts GX GY Coordinates to a Hectare Number
gxgy.to.index           Converts GX GY Coordinates to a Quadrate Number
gxgy.to.rowcol          Converts a GX GY Coordinates to Row and Column
                        Numbers
index.to.gxgy           Converts a Quadrate Number to GX GY Coordinates
index.to.rowcol         Converts a Quadrate Number (Indext) to Row and
                        Column Numbers
map                     Plot of the Spatial Location of Trees of a
                        Species
maptopo                 Plot a Contour Map of Topography of a CTFS Plot
meaninterval.quad       Mean Interval Between Census for Quadrates
meantopo.quad           Mean Topographic Values for Quadrates
mergecensus             Merging Two Censuses of CTFS Plot Data
mortality               Annual Mortality Rates by Categories (User
                        defined groups)
mortality.calculation   Compute Annual Mortality Rates and Confidence
                        Limits given N, S and Time
mortality.dbh           Annual Mortality Rates for DBH Classes
mortality.eachspp       Annual Mortality Rate for Species by DBH Class
neighbordens.1sp        Create File of Neighbor Attributes for a Single
                        Species
pick.dbh                Determine the Appropriate DBH to Use for
                        Computation of Above Ground Biomass
readelevdata            Read a Text or RData Dataframe and Make a
                        Matrix, Specifically for Elevation Data
recruitment             Annual Recruitment Rate by Categories (User
                        defined groups)
recruitment.calculation
                        Compute Annual Recruitment Rates and Confidence
                        Limits given N, S and Time
recruitment.eachspp     Annual Recruitment Rate for Species
rowcol.to.index         Converts a Row and Column to a Quadrate Number
select.randquad         Randomly Select the Coordinates of Quadrate
sep.data                Re-structures a Dataframe into a List of
                        Dataframes by Values in a Vector
sep.dbh                 Creates a Vector of DBH Classes for each Tree
                        in a Dataset
sep.quadinfo            Creates a Vector of Quadrate Characteristics
                        for each Tree in a Dataset
sep.species             Separate One or More Dataframes of Tree Records
                        from a List
sep.sppinfo             Creates a Vector of Species Characteristics for
                        each Tree in a Dataset
sgf.area                Number of Species, Genera and Families for a
                        single defined Area
sgf.meanarea            Mean Number of Species, Genera and Families for
                        Replicates of Randomly Selected Areas
sgf.meanarea.range      Mean Number of Species, Genera and Families for
                        Replicates of Randomly Selected Areas of a
                        Given Range of Area Sizes and Shapes
sgf.randarea            Number of Species, Genera and Families for
                        Randomly Selected Area
socrex90.neigh          Structure of Datasets for Density Dependence
                        Analysis
splitdata               Re-structures a Dataframe into a List of
                        Dataframes by values of a Column in the
                        Dataframe
spp.randarea.range      Number of Species in Randomly Selected Areas of
                        Various Shapes and Sizes
texttordata             Creates CTFS R dataset from any tab delimited
                        text file
tojulian                Converts Calendar Dates to Julian Dates and
                        Back
trim.growth             Determines if the Growth Rate of a Tree is
                        Within Defined Limits
tst.bci90.full          Structure of CTFS Long Term Forest Data Set for
                        a Single Census
tst.bci90.mult          Structure of the CTFS Long Term Forest Data Set
                        Multiple Stem dataset for a single census
tst.ctfs.wsg            Wood Specific Gravity for Tropical Tree Species
