Entry: BEST.kendall
Aliases: BEST.kendall
Keywords: cluster htest
Description: BLAST type search for similar co-expressions with controlled FDR and MAS using Kendall correlation statistic
URL: ../../../library/GeneNT/html/BEST.kendall.html

Entry: BEST.pearson
Aliases: BEST.pearson
Keywords: cluster htest
Description: BLAST type search for similar co-expressions with controlled FDR and MAS using Pearson correlation statistic
URL: ../../../library/GeneNT/html/BEST.pearson.html

Entry: cor.confint
Aliases: cor.confint
Keywords: cluster htest
Description: Asymptotic confidence intervals of Pearson correlation coefficient
URL: ../../../library/GeneNT/html/cor.confint.html

Entry: cor.rep
Aliases: cor.rep
Keywords: cluster htest
Description: Estimating gene expression correlation from replicated microarray data
URL: ../../../library/GeneNT/html/cor.rep.html

Entry: cor.rep.bootci
Aliases: cor.rep.bootci
Keywords: cluster htest
Description: Bootstrap Confidence Interval for multivariate correlation estimator from replicated gene microarray data
URL: ../../../library/GeneNT/html/cor.rep.bootci.html

Entry: cor.rep.pv
Aliases: cor.rep.pv
Keywords: cluster htest
Description: Multivariate correlation estimator from replicated gene microarray data
URL: ../../../library/GeneNT/html/cor.rep.pv.html

Entry: corfdrci
Aliases: corfdrci
Keywords: cluster htest
Description: Two-stage screening procedure for screening gene pairs based on Pearson correlation statistic
URL: ../../../library/GeneNT/html/corfdrci.html

Entry: corfdrci.inv
Aliases: corfdrci.inv
Keywords: cluster htest
Description: Inverse screening procedure based on Pearson correlation coefficient
URL: ../../../library/GeneNT/html/corfdrci.inv.html

Entry: dat
Aliases: dat
Keywords: datasets
Description: Part of galactose metabolism data. Ideker et al. Science, 292:929-934
URL: ../../../library/GeneNT/html/dat.html

Entry: getBM
Aliases: getBM
Keywords: cluster htest
Description: Generate Pajek compatible matrix from screened gene pairs
URL: ../../../library/GeneNT/html/getBM.html

Entry: kendall.confint
Aliases: kendall.confint
Keywords: cluster htest
Description: Asymptotic confidence intervals of Pearson correlation coefficient
URL: ../../../library/GeneNT/html/kendall.confint.html

Entry: kendallfdrci
Aliases: kendallfdrci
Keywords: cluster htest
Description: Two-stage screening procedure based on Kendall correlation coefficient
URL: ../../../library/GeneNT/html/kendallfdrci.html

Entry: ncclust
Aliases: ncclust
Keywords: cluster htest
Description: Network constrained clustering
URL: ../../../library/GeneNT/html/ncclust.html

Entry: pcor.confint
Aliases: pcor.confint
Keywords: cluster htest
Description: Asymptotic confidence intervals of partial correlation coefficient
URL: ../../../library/GeneNT/html/pcor.confint.html

Entry: pcorfdrci
Aliases: pcorfdrci
Keywords: cluster htest
Description: Two-stage screening procedure based on partial correlation coefficient in Graphic Gaussian Model framework
URL: ../../../library/GeneNT/html/pcorfdrci.html

Entry: pcorfdrci.inv
Aliases: pcorfdrci.inv
Keywords: cluster htest
Description: Inverse screening procedure based on Kendall correlation coefficient
URL: ../../../library/GeneNT/html/pcorfdrci.inv.html

Entry: sm.name
Aliases: sm.name
Keywords: cluster htest
Description: Extract gene names from data matrix
URL: ../../../library/GeneNT/html/sm.name.html

Entry: tdclust
Aliases: tdclust
Keywords: cluster htest
Description: Traditional clustering
URL: ../../../library/GeneNT/html/tdclust.html
