getTrans {seqinr} | R Documentation

## Generic Function to translate a sequence

### Description

Methods for the class of sequences: `SeqFastadna`, `SeqFastaAA`, `SeqAcnucWeb`, `SeqFrag`.

### Usage

    getTrans(seq, frame = 0, sens = "F", numcode = 1)

### Arguments

`seq` | an object of class `SeqFastadna`, `SeqFastaAA`, `SeqAcnucWeb` or `SeqFrag`.
`frame` | Frame(s) (0,1,2) to translate. By default the frame `0` is used.
`sens` | Sense to translate: `F` for forward sense and `R` for revers sense.
`numcode` | The number of the code to use. By default the standard genetic code is used.

### Value

a vector of chars containing the sequence

### Author(s)

D. Charif

### References

`citation("seqinr")`

### See Also

`translate`

### Examples

     methods(getTrans)

[Package seqinr version 1.0-4 Index]