gbk2g2 {seqinr} | R Documentation

## Conversion of a GenBank format file into a glimmer-like one

### Description

This function reads a file in GenBank format and converts the features corresponding to CDS (Coding Sequences) into a format similar to glimmer program output.

### Usage

    gbk2g2(gbkfile = "ftp://pbil.univ-lyon1.fr/pub/logiciel/oriloc/ct.gbk",
    g2.coord = "g2.coord")

### Arguments

`gbkfile` | The name of the GenBank file
`g2.coord` | The name of the glimmer-like file

### Details

Partial CDS (either 5' or 3') and join in features are discarded.

### Value

### Author(s)

J.R. lobry

### References

`citation("seqinr")`

### See Also

`oriloc`

### Examples

     ## Not run:  gbk2g2()

[Package seqinr version 1.0-4 Index]