SeqAcnucWeb              package:seqinr              R Documentation

_S_e_q_u_e_n_c_e _c_o_m_i_n_g _f_r_o_m _a_n _A_C_N_U_C _d_a_t_a _b_a_s_e_s _l_o_c_a_t_e_d _o_n _t_h_e _w_e_b

_D_e_s_c_r_i_p_t_i_o_n:

     'as.SeqAcnucWeb' is called by many functions, for instance by
     'query.SeqAcnucWeb', and should not directly be called by the
     user. It creates an object of class 'SeqAcnucWeb'. 
     'is.SeqAcnucWeb' returns TRUE if the object is of class
     'SeqAcnucWeb'.

_U_s_a_g_e:

     as.SeqAcnucWeb(object,length, frame, ncbigc,socket=F)
     is.SeqAcnucWeb(object)

_A_r_g_u_m_e_n_t_s:

  object: a string giving the name of a sequence presents in the data
          base

  length: a string giving the length of the sequence presents in the
          data base

   frame: a string giving the frame of the sequence presents in the
          data base

  ncbigc: a string giving the ncbi genetic code of the sequence
          presents in the data base

  socket: an object of class 'socket'

_V_a_l_u_e:

     'as.SeqAcnucWeb' returns an object sequence of class 'SeqAcnucWeb'

_A_u_t_h_o_r(_s):

     D. Charif

_R_e_f_e_r_e_n_c_e_s:

      'citation("seqinr")'

_E_x_a_m_p_l_e_s:

       ## Not run: s = choosebank.socket("genbank")
       ## Not run: query.socket(s$socket,"felis","sp=felis catus et t=cds et o=mitochondrion")
       ## Not run: is.SeqAcnucWeb(felis$req[[1]])

