build.data.paired {varmixt} | R Documentation

## How to build a gene expression data object with paired data

### Description

Performs simple operation to build an object for further processing with analysis functions

### Usage

    build.data.paired(name, ratio, meanint, badqual = NULL, gene.anot = NULL,min.rep=2)

### Arguments

`name` | vector with the identifier of each gene (one gene per row).
`ratio` | matrix of gene log-ratio. The matrix has one gene per row and one replicate per column
`meanint` | matrix of gene log-intensity
`badqual` | Optional argument : integer matrix of number of bad quality observation per gene and replicate. Do not use badqual with different number of replicates in each condition
`gene.anot` | Optional arguments (vector, data.frame, matrix..) with extra annotation on the genes
`min.rep` | Minimum number of non-missing value per gene and per condition. Must be at least 2.

### Details

### Value

A gene expression data object for futher processing

### Note

### Author(s)

Paul Delmar

### References

### See Also

### Examples

[Package varmixt version 0.2-4 Index]