Entry: Activity10
Aliases: Activity10 DATA10
Keywords: datasets
Description: Activity patterns of a statistician for 20 days
URL: ../../../library/compositions/html/Activity10.html

Entry: Activity31
Aliases: Activity31 DATA31
Keywords: datasets
Description: Activity patterns of a statistician for 20 days
URL: ../../../library/compositions/html/Activity31.html

Entry: AnimalVegetation
Aliases: AnimalVegetation Data25
Keywords: datasets
Description: Animal and vegetation measurement
URL: ../../../library/compositions/html/AnimalVegetation.html

Entry: ArcticLake
Aliases: ArcticLake Data05
Keywords: datasets
Description: Artic lake sediment samples of different water depth
URL: ../../../library/compositions/html/ArcticLake.html

Entry: Bayesite
Aliases: Bayesite Data21
Keywords: datasets
Description: Permeabilities of bayesite
URL: ../../../library/compositions/html/Bayesite.html

Entry: Blood23
Aliases: Blood23 Data23
Keywords: datasets
Description: Blood samples
URL: ../../../library/compositions/html/Blood23.html

Entry: Boxite
Aliases: Boxite Data03
Keywords: datasets
Description: Compositions and depth of 25 specimens of boxite
URL: ../../../library/compositions/html/Boxite.html

Entry: ClamEast
Aliases: ClamEast Data14
Keywords: datasets
Description: Color-size compositions of 20 clam colonies from East Bay
URL: ../../../library/compositions/html/ClamEast.html

Entry: ClamWest
Aliases: ClamWest Data15
Keywords: datasets
Description: Color-size compositions of 20 clam colonies from West Bay
URL: ../../../library/compositions/html/ClamWest.html

Entry: Coxite
Aliases: Coxite Data04
Keywords: datasets
Description: Compositions, depths and porosities of 25 specimens of coxite
URL: ../../../library/compositions/html/Coxite.html

Entry: DiagnosticProb
Aliases: DiagnosticProb Data17
Keywords: datasets
Description: Diagnostic probabilities
URL: ../../../library/compositions/html/DiagnosticProb.html

Entry: Firework
Aliases: Firework Data13
Keywords: datasets
Description: Firework mixtures
URL: ../../../library/compositions/html/Firework.html

Entry: Glacial
Aliases: DATA18 Glacial
Keywords: datasets
Description: Compositions and total pebble counts of 92 glacial tills
URL: ../../../library/compositions/html/Glacial.html

Entry: Hongite
Aliases: Data01 Hongite
Keywords: datasets
Description: Compositions of 25 specimens of hongite
URL: ../../../library/compositions/html/Hongite.html

Entry: HouseholdExp
Aliases: HouseholdExp DATA08 HEMF
Keywords: datasets
Description: Household Expenditures
URL: ../../../library/compositions/html/HouseholdExp.html

Entry: Hydrochem
Aliases: Hydrochem
Keywords: datasets
Description: Hydrochemical composition data set of Llobregat river basin water (NE Spain)
URL: ../../../library/compositions/html/Hydrochem.html

Entry: Kongite
Aliases: Kongite Data02
Keywords: datasets
Description: Compositions of 25 specimens of kongite
URL: ../../../library/compositions/html/Kongite.html

Entry: Metabolites
Aliases: Data09 Metabolites
Keywords: datasets
Description: Steroid metabolite patterns in adults and children
URL: ../../../library/compositions/html/Metabolites.html

Entry: PogoJump
Aliases: Data19 PogoJump
Keywords: datasets
Description: Honk Kong Pogo-Jumps Championship
URL: ../../../library/compositions/html/PogoJump.html

Entry: Sediments
Aliases: Data20 Sediments
Keywords: datasets
Description: Proportions of sand, silt and clay in sediments specimens
URL: ../../../library/compositions/html/Sediments.html

Entry: SerumProtein
Aliases: Data16 SerumProtein
Keywords: datasets
Description: Serum Protein compositions of blood samples
URL: ../../../library/compositions/html/SerumProtein.html

Entry: ShiftOperators
Aliases: Data22 ShiftOperators
Keywords: datasets
Description: Shifts of machine operators
URL: ../../../library/compositions/html/ShiftOperators.html

Entry: SimulatedAmounts
Aliases: SimulatedAmounts sa.dirichlet sa.dirichlet.dil sa.dirichlet.mix sa.dirichlet5 sa.dirichlet5.dil sa.dirichlet5.mix sa.uniform sa.uniform.dil sa.uniform.mix sa.uniform5 sa.uniform5.dil sa.uniform5.mix sa.lognormals sa.lognormals.dil sa.lognormals.mix sa.lognormals5 sa.lognormals5.dil sa.lognormals5.mix sa.tnormals sa.tnormals.dil sa.tnormals.mix sa.tnormals5 sa.tnormals5.dil sa.tnormals5.mix sa.groups sa.groups.dil sa.groups.mix sa.groups5 sa.groups5.dil sa.groups5.mix sa.groups.area sa.groups5.area
Keywords: datasets
Description: Simulated amount datasets
URL: ../../../library/compositions/html/SimulatedAmounts.html

Entry: Skulls
Aliases: Data24 Skulls
Keywords: datasets
Description: Measurement of skulls
URL: ../../../library/compositions/html/Skulls.html

Entry: SkyeAFM
Aliases: Data06 SkyeAFM
Keywords: datasets
Description: AFM compositions of 23 aphyric Skye lavas
URL: ../../../library/compositions/html/SkyeAFM.html

Entry: Supervisor
Aliases: Data07 Supervisor
Keywords: datasets
Description: Proportions of supervisor's statements assigned to different categories
URL: ../../../library/compositions/html/Supervisor.html

Entry: WhiteCells
Aliases: Data11 WhiteCells
Keywords: datasets
Description: White-cell composition of 30 blood samples by two different methods
URL: ../../../library/compositions/html/WhiteCells.html

Entry: Yatquat
Aliases: Data12 Yatquat
Keywords: datasets
Description: Yatquat fruit evaluation
URL: ../../../library/compositions/html/Yatquat.html

Entry: acomp
Aliases: acomp
Keywords: classes
Description: Aitchison compositions
URL: ../../../library/compositions/html/acomp.html

Entry: acomparith
Aliases: power.acomp *.acomp /.acomp
Keywords: multivariate
Description: Power transform in the simplex
URL: ../../../library/compositions/html/acomparith.html

Entry: acompmargin
Aliases: acompmargin
Keywords: multivariate
Description: Marginal compositions in Aitchison Compositions
URL: ../../../library/compositions/html/acompmargin.html

Entry: alr
Aliases: alr alr.inv
Keywords: multivariate
Description: Additive log ratio transform
URL: ../../../library/compositions/html/alr.html

Entry: aplus
Aliases: aplus
Keywords: multivariate
Description: Amounts analysed in log-scale
URL: ../../../library/compositions/html/aplus.html

Entry: aplusarithm
Aliases: +.aplus -.aplus *.aplus /.aplus perturbe.aplus power.aplus
Keywords: multivariate
Description: vectorial arithmetic for data sets with aplus class
URL: ../../../library/compositions/html/aplusarithm.html

Entry: apt
Aliases: apt apt.inv
Keywords: multivariate
Description: Additive planar transform
URL: ../../../library/compositions/html/apt.html

Entry: arrows3D
Aliases: arrows3D arrows3D.default
Keywords: multivariate
Description: arrows in 3D, based on package rgl
URL: ../../../library/compositions/html/arrows3d.html

Entry: as.data.frame
Aliases: as.data.frame.acomp as.data.frame.rcomp as.data.frame.aplus as.data.frame.rplus as.data.frame.rmult
Keywords: multivariate
Description: Convert "compositions" classes to data frames
URL: ../../../library/compositions/html/asdataframe.html

Entry: axis3D
Aliases: axis3D
Keywords: multivariate
Description: Drawing a 3D coordiante system to a plot, based on package rgl
URL: ../../../library/compositions/html/axis3d.html

Entry: barplot.acomp
Aliases: barplot.acomp barplot.rcomp barplot.aplus barplot.rplus
Keywords: multivariate
Description: Bar charts of amounts
URL: ../../../library/compositions/html/barplot.html

Entry: biplot3D
Aliases: biplot3D biplot3D.default biplot3D.princomp
Keywords: multivariate
Description: Three-dimensional biplots, based on package rgl
URL: ../../../library/compositions/html/biplot3d.html

Entry: boxplot
Aliases: boxplot.acomp boxplot.rcomp boxplot.rplus boxplot.aplus vp.boxplot vp.logboxplot
Keywords: multivariate
Description: Displaying compositions and amounts with box-plots
URL: ../../../library/compositions/html/boxplot.html

Entry: cdt
Aliases: cdt cdt.default cdt.acomp cdt.rcomp cdt.aplus cdt.rplus cdt.rmult cdt.factor cdt.inv cdt.inv.default cdt.inv.acomp cdt.inv.rcomp cdt.inv.aplus cdt.inv.rplus cdt.inv.rmult
Keywords: multivariate
Description: Centered default transform
URL: ../../../library/compositions/html/cdt.html

Entry: clo
Aliases: clo
Keywords: multivariate
Description: Closure of a composition
URL: ../../../library/compositions/html/clo.html

Entry: clr
Aliases: clr clr.inv
Keywords: multivariate
Description: Centered log ratio transform
URL: ../../../library/compositions/html/clr.html

Entry: clr2ilr
Aliases: clr2ilr ilr2clr clrvar2ilr ilrvar2clr
Keywords: multivariate
Description: Convert between clr and ilr, and between cpt and ipt.
URL: ../../../library/compositions/html/clr2ilr.html

Entry: CoDaDendrogram
Aliases: CoDaDendrogram
Keywords: hplot
Description: Dendrogram representation of acomp or rcomp objects
URL: ../../../library/compositions/html/codadendrogram.html

Entry: missing.compositions
Aliases: compositions.missing compositions.missings composition.missing composition.missings missings is.BDL is.SZ is.MAR is.MNAR is.WMNAR is.MNV is.NMV is.WMNAR is.WZERO has.missings has.missings.default has.missings.rmult SZ MAR MNAR BDL NMV SZvalue MARvalue MNARvalue BDLvalue
Keywords: multivariate
Description: The policy of treatment of missing values in the "compositions" package
URL: ../../../library/compositions/html/compmiss.html

Entry: compositions-package
Aliases: compositions-package compositions
Keywords: package
Description: library(compositions)
URL: ../../../library/compositions/html/compositions.html

Entry: cor.acomp
Aliases: cor cor.default cor.acomp cor.rcomp cor.aplus cor.rplus cor.rmult
Keywords: multivariate
Description: Correlations of amounts and compositions
URL: ../../../library/compositions/html/cor.html

Entry: cpt
Aliases: cpt cpt.inv
Keywords: multivariate
Description: Centered planar transform
URL: ../../../library/compositions/html/cpt.html

Entry: dist
Aliases: dist dist.default
Keywords: multivariate
Description: Distances in variouse approaches
URL: ../../../library/compositions/html/dist.html

Entry: ellipses
Aliases: ellipses ellipses.rmult ellipses.acomp ellipses.rcomp ellipses.aplus ellipses.rplus
Keywords: multivariate
Description: Draw ellipses
URL: ../../../library/compositions/html/ellipses.html

Entry: endmemberCoordinates
Aliases: endmemberCoordinates endmemberCoordinates.inv endmemberCoordinates.default endmemberCoordinates.acomp endmemberCoordinates.aplus endmemberCoordinates.rplus endmemberCoordinatesInv endmemberCoordinatesInv.rmult endmemberCoordinatesInv.acomp endmemberCoordinatesInv.aplus endmemberCoordinatesInv.rcomp endmemberCoordinatesInv.rplus
Keywords: multivariate
Description: Recast amounts as mixtures of end-members
URL: ../../../library/compositions/html/endmemberCoordinates.html

Entry: geometricmean
Aliases: geometricmean geometricmean.row geometricmean.col gsi.geometricmean gsi.geometricmean.row gsi.geometricmean.col
Keywords: univar
Description: The geometric mean
URL: ../../../library/compositions/html/geometricmean.html

Entry: getdetectionlimit
Aliases: getDetectionlimit
Keywords: 
Description: Gets the detection limit stored in the data set
URL: ../../../library/compositions/html/getdetectionlimit.html

Entry: groupparts
Aliases: groupparts groupparts.acomp groupparts.rcomp groupparts.aplus groupparts.rplus
Keywords: multivariate
Description: Group amounts of parts
URL: ../../../library/compositions/html/groupparts.html

Entry: gsi.add
Aliases: gsi.add gsi.sub gsi.mul gsi.div
Keywords: 
Description: Internal functions: Parallel operations of single and multiple datasets
URL: ../../../library/compositions/html/gsiadd.html

Entry: gsi.addclass
Aliases: gsi.addclass
Keywords: 
Description: Internal function: give a derived subclass to an object
URL: ../../../library/compositions/html/gsiaddclass.html

Entry: gsicall
Aliases: gsi.call
Keywords: 
Description: Internal functions of the compositions package
URL: ../../../library/compositions/html/gsicall.html

Entry: gsiinternal1
Aliases: gsi.closespread
Keywords: 
Description: Internal functions of the compositions package
URL: ../../../library/compositions/html/gsiclosespread.html

Entry: gsiCoorInfo
Aliases: gsi.coorInfo gsi.setCoorInfo gsi.getCoorInfo
Keywords: 
Description: Internal functions of the compositions package
URL: ../../../library/compositions/html/gsicoorinfo.html

Entry: gsi.csum
Aliases: gsi.csum gsi.rsum
Keywords: 
Description: Internal function: row and column sums of matrices
URL: ../../../library/compositions/html/gsicsum.html

Entry: gsi.diagExtract
Aliases: gsi.diagExtract
Keywords: 
Description: Internal functions: Get the diagonal of a matrix
URL: ../../../library/compositions/html/gsidiagExtract.html

Entry: gsi.diagGenerate
Aliases: gsi.diagGenerate
Keywords: 
Description: Internal functions: Generate a diagonal matrix
URL: ../../../library/compositions/html/gsidiagGenerate.html

Entry: gsi.drop
Aliases: gsi.drop
Keywords: 
Description: Internal functions: A conditional drop
URL: ../../../library/compositions/html/gsidrop.html

Entry: gsi.eps
Aliases: gsi.eps
Keywords: 
Description: Internal variable: Negligible differences
URL: ../../../library/compositions/html/gsieps.html

Entry: gsi.eq
Aliases: gsi.eq gsi.eq
Keywords: 
Description: Internal function: Checking equality of IEEE special numbers
URL: ../../../library/compositions/html/gsieq.html

Entry: gsi.expandrcomp
Aliases: gsi.expandrcomp
Keywords: multivariate
Description: Internal function: Scaling rcomp
URL: ../../../library/compositions/html/gsiexpandrcomp.html

Entry: gsifiltercall
Aliases: gsi.filtercall
Keywords: 
Description: Calling from a function with the own parameters
URL: ../../../library/compositions/html/gsifiltercall.html

Entry: gsi.getD
Aliases: gsi.getD gsi.getN
Keywords: multivariate
Description: Interal function: Get number of samples and number of parts in a compositional object
URL: ../../../library/compositions/html/gsigetD.html

Entry: gsiinternal
Aliases: gsi
Keywords: 
Description: Internal functions of the compositions package
URL: ../../../library/compositions/html/gsiinternal.html

Entry: gsi2.invperm
Aliases: gsi2.invperm
Keywords: 
Description: Internal function: Invert a permutation
URL: ../../../library/compositions/html/gsiinvperm.html

Entry: gsi.isSingleRow
Aliases: gsi.isSingleRow
Keywords: 
Description: Internal function: Can something be considered as a single multivariate data item?
URL: ../../../library/compositions/html/gsiisSingleRow.html

Entry: gsi.mapin01
Aliases: gsi.mapin01 gsi.mapfrom01 gsi.mapmin gsi.mapmax
Keywords: 
Description: Internal functions: Storing integers as reals
URL: ../../../library/compositions/html/gsimap01.html

Entry: gsi.margin
Aliases: gsi.margin gsi.margin.acomp gsi.margin.rcomp gsi.margin.aplus gsi.margin.rplus
Keywords: 
Description: Internal function: Compute a desired compositional margin
URL: ../../../library/compositions/html/gsimargin.html

Entry: gsi.merge2signary
Aliases: gsi.merge2signary gsi.ilrBase2signary gsi.optimalilrBase gsi.buildilrBase gsi.signary2ilrBase gsi.OrderIlr
Keywords: multivariate
Description: Auxiliary functions to compute user-defined ilr and ipt transforms.
URL: ../../../library/compositions/html/gsimerge2signary.html

Entry: gsiinternal2
Aliases: gsi.pairrelativeMatrix
Keywords: 
Description: Internal functions of the compositions package
URL: ../../../library/compositions/html/gsipairrelativeMatrix.html

Entry: gsipairs
Aliases: gsi.pairs gsi.add2pairs gsi.plots
Keywords: 
Description: Internal functions of the compositions package
URL: ../../../library/compositions/html/gsipairs.html

Entry: gsi.plain
Aliases: gsi.plain
Keywords: 
Description: Internal function: Convert to plain vector or matrix
URL: ../../../library/compositions/html/gsiplain.html

Entry: gsiinternal
Aliases: gsi.plotmargin
Keywords: 
Description: Internal functions of the compositions package
URL: ../../../library/compositions/html/gsiplotmargin.html

Entry: gsi.recode
Aliases: gsi.recodeM2C gsi.recodeC2M gsi.recodeM2Clean gsi.cleanR
Keywords: 
Description: Internal function: Recode missings with IEEE number and vice versa
URL: ../../../library/compositions/html/gsirecode.html

Entry: gsireset3D
Aliases: gsi.reset3D
Keywords: 
Description: Internal functions of the compositions package
URL: ../../../library/compositions/html/gsireset3d.html

Entry: gsi.simshape
Aliases: gsi.simshape
Keywords: 
Description: Internal function: Reshape an object to the shape type of another
URL: ../../../library/compositions/html/gsisimshape.html

Entry: gsiinternal3
Aliases: gsi.spreadToIsoSpace
Keywords: 
Description: Internal functions of the compositions package
URL: ../../../library/compositions/html/gsispreadToIsoSpace.html

Entry: gsi.svdsolve
Aliases: gsi.svdsolve
Keywords: 
Description: Internal function: Solves singular and non square equation systems
URL: ../../../library/compositions/html/gsisvdsolve.html

Entry: gsi.textpanel
Aliases: gsi.textpanel
Keywords: 
Description: Internal function: A panel displaying a label only
URL: ../../../library/compositions/html/gsitextpanel.html

Entry: idt
Aliases: idt idt.default idt.acomp idt.rcomp idt.aplus idt.rplus idt.rmult idt.factor idt.inv idt.inv.default idt.inv.acomp idt.inv.rcomp idt.inv.aplus idt.inv.rplus idt.inv.rmult
Keywords: multivariate
Description: Isometric default transform
URL: ../../../library/compositions/html/idt.html

Entry: iit
Aliases: iit iit.inv
Keywords: multivariate
Description: Isometric identity transform
URL: ../../../library/compositions/html/iit.html

Entry: ilr
Aliases: ilr ilr.inv
Keywords: multivariate
Description: Isometric log ratio transform
URL: ../../../library/compositions/html/ilr.html

Entry: ilrBase
Aliases: ilrBase gsi.ilrBase ilrBaseList
Keywords: multivariate
Description: The canonical basis in the clr plane used for ilr and ipt transforms.
URL: ../../../library/compositions/html/ilrBase.html

Entry: ilt
Aliases: ilt ilt.inv
Keywords: multivariate
Description: Isometric log transform
URL: ../../../library/compositions/html/ilt.html

Entry: ipt
Aliases: ipt ipt.inv ucipt.inv
Keywords: multivariate
Description: Isometric planar transform
URL: ../../../library/compositions/html/ipt.html

Entry: is.acomp
Aliases: is.acomp is.aplus is.rcomp is.rplus is.rmult
Keywords: 
Description: Check for compositional data type
URL: ../../../library/compositions/html/isAcomp.html

Entry: isoPortionLines
Aliases: isoPortionLines isoPortionLines.acomp isoPortionLines.rcomp isoProportionLines isoProportionLines.acomp isoProportionLines.rcomp
Keywords: multivariate
Description: Isoportion- and Isoproportion-lines
URL: ../../../library/compositions/html/isoportion.html

Entry: kingTetrahedron
Aliases: kingTetrahedron
Keywords: dynamic
Description: Ploting composition into rotable tetrahedron
URL: ../../../library/compositions/html/kingtetrahedron.html

Entry: lines
Aliases: lines.rmult lines.acomp lines.rcomp lines.aplus lines.rplus
Keywords: multivariate
Description: Draws connected lines from point to point.
URL: ../../../library/compositions/html/lines.html

Entry: matmult
Aliases: %*% %*%.default
Keywords: multivariate
Description: inner product for matrices and vectors
URL: ../../../library/compositions/html/matmult.html

Entry: acompscalarproduct
Aliases: %*%.acomp %*%.aplus
Keywords: multivariate
Description: inner product for datasets with a vector space structure
URL: ../../../library/compositions/html/matmultacomp.html

Entry: mean.acomp
Aliases: mean.acomp mean.rcomp mean.aplus mean.rplus mean.rmult
Keywords: multivariate
Description: Mean amounts and mean compositions
URL: ../../../library/compositions/html/meanAcomp.html

Entry: meanrow
Aliases: mean.row mean.col
Keywords: univar
Description: The arithmetic mean of rows or columns
URL: ../../../library/compositions/html/meanrow.html

Entry: missingProjector
Aliases: missingProjector missingProjector.acomp missingProjector.rcomp missingProjector.aplus missingProjector.rplus missingProjector.rmult
Keywords: 
Description: Returns a projector the the observed space in case of missings.
URL: ../../../library/compositions/html/missingProjector.html

Entry: missingsummary
Aliases: missingSummary missingType
Keywords: 
Description: Classify and summarize missing values in a dataset
URL: ../../../library/compositions/html/missingsummary.html

Entry: transformations from 'mixtures' to 'compositions' classes
Aliases: mix.2aplus mix.2acomp mix.2rcomp mix.2rplus mix.2rmult
Keywords: 
Description: Transformations from 'mixtures' to 'compositions' classes
URL: ../../../library/compositions/html/mix2compositions.html

Entry: mix.Read
Aliases: mix.Read
Keywords: 
Description: Reads a data file in a mixR format
URL: ../../../library/compositions/html/mixRead.html

Entry: mvar
Aliases: mvar mvar.default mcov mcov.default mcor mcor.default msd msd.default
Keywords: multivariate
Description: Metric summary statistics of real, amount or compositional data
URL: ../../../library/compositions/html/mvar.html

Entry: names
Aliases: names.acomp names.aplus names.rcomp names.rplus names.rmult names<-.acomp names<-.aplus names<-.rcomp names<-.rplus names<-.rmult
Keywords: multivariate
Description: The names of the parts
URL: ../../../library/compositions/html/names.html

Entry: norm
Aliases: norm.default norm.acomp norm.aplus norm.rcomp norm.rplus norm.rmult
Keywords: multivariate
Description: Vector space norm
URL: ../../../library/compositions/html/norm.html

Entry: normalize
Aliases: normalize normalize.default
Keywords: multivariate
Description: Normalize vectors to norm 1
URL: ../../../library/compositions/html/normalize.html

Entry: oneOrDataset
Aliases: oneOrDataset
Keywords: multivariate
Description: Treating single compositions as one-row datasets
URL: ../../../library/compositions/html/oneOrDataset.html

Entry: perturbe
Aliases: perturbe +.acomp -.acomp
Keywords: multivariate
Description: Perturbation of compositions
URL: ../../../library/compositions/html/perturbe.html

Entry: plot.acomp
Aliases: plot.acomp plot.rcomp
Keywords: multivariate
Description: Displaying compositions in ternary diagrams
URL: ../../../library/compositions/html/plot.html

Entry: plot3D
Aliases: plot3D plot3D.default
Keywords: multivariate
Description: plot in 3D based on rgl
URL: ../../../library/compositions/html/plot3d.html

Entry: plot3D
Aliases: plot3D.acomp plot3D.rcomp
Keywords: multivariate
Description: 3D-plot of compositional data
URL: ../../../library/compositions/html/plot3dacomp.html

Entry: plot3D
Aliases: plot3D.aplus
Keywords: multivariate
Description: 3D-plot of positive data
URL: ../../../library/compositions/html/plot3daplus.html

Entry: plot3Drmult
Aliases: plot3D.rmult
Keywords: multivariate
Description: plot in 3D based on rgl
URL: ../../../library/compositions/html/plot3drmult.html

Entry: plot3Drplus
Aliases: plot3D.rplus
Keywords: multivariate
Description: plot in 3D based on rgl
URL: ../../../library/compositions/html/plot3drplus.html

Entry: plotmissingsummary
Aliases: plot.missingSummary as.missingSummary
Keywords: multivariate
Description: Plot a Missing Summary
URL: ../../../library/compositions/html/plotmissingsummary.html

Entry: plot.aplus
Aliases: plot.aplus plot.rplus plot.rmult
Keywords: multivariate
Description: Displaying amounts in scatterplots
URL: ../../../library/compositions/html/plotpos.html

Entry: powerofpsdmatrix
Aliases: powerofpsdmatrix
Keywords: multivariate
Description: power transform of a matrix
URL: ../../../library/compositions/html/powerofmatrix.html

Entry: princomp.acomp
Aliases: princomp.acomp print.princomp.acomp plot.princomp.acomp plot.princomp.acomp predict.princomp.acomp
Keywords: multivariate
Description: Principal component analysis for Aitchison compositions
URL: ../../../library/compositions/html/princompacomp.html

Entry: princomp.aplus
Aliases: princomp.aplus print.princomp.aplus plot.princomp.aplus plot.princomp.aplus predict.princomp.aplus
Keywords: multivariate
Description: Principal component analysis for amounts in log geometry
URL: ../../../library/compositions/html/princompaplus.html

Entry: princomp.rcomp
Aliases: princomp.rcomp print.princomp.rcomp plot.princomp.rcomp predict.princomp.rcomp
Keywords: multivariate
Description: Principal component analysis for real compositions
URL: ../../../library/compositions/html/princomprcomp.html

Entry: princomp.rmult
Aliases: princomp.rmult
Keywords: multivariate
Description: Principal component analysis for real data
URL: ../../../library/compositions/html/princomprmult.html

Entry: princomp.rplus
Aliases: princomp.rplus print.princomp.rplus plot.princomp.rplus predict.princomp.rplus
Keywords: multivariate
Description: Principal component analysis for real amounts
URL: ../../../library/compositions/html/princomprplus.html

Entry: qqnorm
Aliases: qqnorm.acomp qqnorm.rcomp qqnorm.rplus qqnorm.aplus vp.qqnorm
Keywords: multivariate
Description: Normal quantile plots for compositions and amounts
URL: ../../../library/compositions/html/qqnorm.html

Entry: rDirichlet
Aliases: rDirichlet rDirichlet.acomp rDirichlet.rcomp
Keywords: multivariate
Description: Dirichlet distribution
URL: ../../../library/compositions/html/rDirichlet.html

Entry: ratioLoadings
Aliases: relativeLoadings relativeLoadings.princomp.acomp relativeLoadings.princomp.aplus relativeLoadings.princomp.rcomp relativeLoadings.princomp.rplus print.relativeLoadings.princomp.acomp print.relativeLoadings.princomp.aplus print.relativeLoadings.princomp.rcomp print.relativeLoadings.princomp.rplus plot.relativeLoadings.princomp.acomp plot.relativeLoadings.princomp.aplus plot.relativeLoadings.princomp.rcomp plot.relativeLoadings.princomp.rplus
Keywords: multivariate
Description: Loadings of relations of two amounts
URL: ../../../library/compositions/html/ratioLoadings.html

Entry: rcomp
Aliases: rcomp
Keywords: multivariate
Description: Compositions as elements of the simplex embedded in the D-dimensional real space
URL: ../../../library/compositions/html/rcomp.html

Entry: rcomparithm
Aliases: +.rcomp -.rcomp *.rcomp /.rcomp convex.rcomp
Keywords: multivariate
Description: Arithmetic operations for compositions in a real geometry
URL: ../../../library/compositions/html/rcomparithm.html

Entry: rcompmargin
Aliases: rcompmargin
Keywords: multivariate
Description: Marginal compositions in real geometry
URL: ../../../library/compositions/html/rcompmargin.html

Entry: Read standard data files
Aliases: read.geoeas read.geoEAS
Keywords: 
Description: Reads a data file in a geoeas format
URL: ../../../library/compositions/html/readgeoeas.html

Entry: rlnorm
Aliases: rlnorm.rplus dlnorm.rplus
Keywords: multivariate
Description: The multivariate lognormal distribution
URL: ../../../library/compositions/html/rlnorm.html

Entry: rmult
Aliases: rmult print.rmult
Keywords: multivariate
Description: Simple treatment of real vectors
URL: ../../../library/compositions/html/rmult.html

Entry: rmultarithm
Aliases: +.rmult -.rmult *.rmult /.rmult
Keywords: multivariate
Description: vectorial arithmetic for datasets in a classical vector scale
URL: ../../../library/compositions/html/rmultarithm.html

Entry: rmultmatmult
Aliases: %*%.rmult
Keywords: multivariate
Description: inner product for datasets with vector scale
URL: ../../../library/compositions/html/rmultmatmult.html

Entry: rnorm
Aliases: rnorm.acomp rnorm.rcomp rnorm.aplus rnorm.rplus rnorm.rmult dnorm.acomp dnorm.aplus dnorm.rmult
Keywords: multivariate
Description: Normal distributions on special spaces
URL: ../../../library/compositions/html/rnorm.html

Entry: rplus
Aliases: rplus
Keywords: multivariate
Description: Amounts i.e. positive numbers analysed as objects of the real vector space
URL: ../../../library/compositions/html/rplus.html

Entry: rplusarithm
Aliases: +.rplus -.rplus *.rplus /.rplus mul.rplus
Keywords: multivariate
Description: vectorial arithmetic for data sets with rplus class
URL: ../../../library/compositions/html/rplusarithm.html

Entry: runif
Aliases: runif.acomp runif.rcomp
Keywords: multivariate
Description: The uniform distribution on the simplex
URL: ../../../library/compositions/html/runif.html

Entry: scalar
Aliases: scalar scalar.default
Keywords: multivariate
Description: Parallel scalar products
URL: ../../../library/compositions/html/scalar.html

Entry: scale
Aliases: scale.acomp scale.aplus scale.rcomp scale.rplus scale.rmult
Keywords: multivariate
Description: Normalizing datasets by centering and scaling
URL: ../../../library/compositions/html/scale.html

Entry: segments
Aliases: segments.rmult segments.acomp segments.rcomp segments.aplus segments.rplus
Keywords: multivariate
Description: Draws straight lines from point to point.
URL: ../../../library/compositions/html/segments.html

Entry: simulatemissings
Aliases: simulateMissings
Keywords: datagen
Description: Artifical simulation of various kinds of missings
URL: ../../../library/compositions/html/simulatemissing.html

Entry: split
Aliases: split.acomp split.aplus split.rcomp split.rplus split.rmult
Keywords: multivariate
Description: Splitting datasets in groups given by factors
URL: ../../../library/compositions/html/split.html

Entry: straight
Aliases: straight straight.rmult straight.acomp straight.rcomp straight.aplus straight.rplus
Keywords: multivariate
Description: Draws straight lines.
URL: ../../../library/compositions/html/straight.html

Entry: summary.acomp
Aliases: summary.acomp
Keywords: multivariate
Description: Summarizing a compositional dataset in terms of ratios
URL: ../../../library/compositions/html/summaryAcomp.html

Entry: summary.aplus
Aliases: summary.aplus summary.rplus summary.rmult
Keywords: multivariate
Description: Summaries of amounts
URL: ../../../library/compositions/html/summaryAplus.html

Entry: summary.rcomp
Aliases: summary.rcomp
Keywords: multivariate
Description: Summary of compositions in real geometry
URL: ../../../library/compositions/html/summaryRcomp.html

Entry: sumprojector
Aliases: sumMissingProjector sumMissingProjector.acomp sumMissingProjector.rcomp sumMissingProjector.aplus sumMissingProjector.rplus sumMissingProjector.rmult
Keywords: multivariate
Description: Compute the global projector to the observed subspace.
URL: ../../../library/compositions/html/sumprojector.html

Entry: totals
Aliases: totals totals.acomp totals.aplus totals.rcomp totals.rplus
Keywords: multivariate
Description: Total sum of amounts
URL: ../../../library/compositions/html/totals.html

Entry: ult
Aliases: ult ult.inv Kappa
Keywords: multivariate
Description: Uncentered log transform
URL: ../../../library/compositions/html/ult.html

Entry: var.acomp
Aliases: var var.default var.acomp var.rcomp var.aplus var.rplus var.rmult cov cov.default cov.acomp cov.rcomp cov.aplus cov.rplus cov.rmult
Keywords: multivariate
Description: Variances and covariances of amounts and compositions
URL: ../../../library/compositions/html/varAcomp.html

Entry: variation
Aliases: variation variation.default variation.acomp variation.rcomp variation.aplus variation.rplus variation.rmult
Keywords: multivariate
Description: Variation matrices of amounts and compositions
URL: ../../../library/compositions/html/variation.html

Entry: zeroreplace
Aliases: zeroreplace
Keywords: multivariate
Description: Zero-replacement routine
URL: ../../../library/compositions/html/zeroreplace.html
