checksubstance             package:drfit             R Documentation

_C_h_e_c_k _r_a_w _d_a_t_a _f_o_r _a _s_p_e_c_i_f_i_e_d _s_u_b_s_t_a_n_c_e

_D_e_s_c_r_i_p_t_i_o_n:

     Report metadata for a specified substance from a specified
     database, and plot the data.

_U_s_a_g_e:

       checksubstance(substance, db = "cytotox", experimentator = "%", 
         celltype = "%", enzymetype = "%", organism = "%", 
         endpoint = "%",
         whereClause = "1", ok = "%")

_A_r_g_u_m_e_n_t_s:

substance: The name of the substance identifying it within the
          database.

      db: The database to be used. Currently, the databases "cytotox"
          and "enzymes" of the UFT Department of Bioorganic Chemistry
          are supported (default is "cytotox").

experimentator: The name of the experimentator whose data is to be
          used. Default is "%", which means that data from all
          experimentators are shown.

celltype: Currently, only data for IPC-81, C6, NB4, HeLa, Jurkat and
          U937 are supported.  Default is "%", i.e. data for any cell
          type will be displayed.

enzymetype: Currently, only data for AChE, GR and GST are supported.
          The default value is "%", i.e. data for any enzyme type will
          be displayed.

organism: The latin name of the tested organism, if the ecotox db was
          selected. The default value is "%", i.e. data for any
          organism will be displayed.

endpoint: The endpoint that should be used for selecting the data. Only
          important if the database "ecotox" is used. Defaults to "%".

whereClause: With this argument, additional conditions for the SQL
          query can be set,  e.g. "plate != 710". The default is 1 (in
          SQL syntax this means TRUE).

      ok: With the default value "%", all data in the database is
          retrieved for the  specified substance.

_V_a_l_u_e:

     The function lists a report and shows one graph.

_A_u_t_h_o_r(_s):

     Johannes Ranke  jranke@uni-bremen.de  <URL:
     http://www.uft.uni-bremen.de/chemie/ranke>

_E_x_a_m_p_l_e_s:

     # Check substance IM14 BF4 in the cytotox database
     ## Not run: checksubstance("IM14 BF4")

