getGOGraph               package:GOSim               R Documentation

_G_e_t _g_r_a_p_h_N_E_L _o_b_j_e_c_t _w_i_t_h _l_e_a_v_e_s _s_p_e_c_i_f_i_e_d _i_n _t_h_e _a_r_g_u_m_e_n_t_s.

_D_e_s_c_r_i_p_t_i_o_n:

     Returns a graphNEL object representing the GO graph with leaves
     specified in the argument.

_U_s_a_g_e:

     getGOGraph(term)

_A_r_g_u_m_e_n_t_s:

    term: character vector of GO terms 

_D_e_t_a_i_l_s:

     The result is computed within the currently set ontology
     ("BP","MF","CC").

_V_a_l_u_e:

     graphNEL object

_N_o_t_e:

     directly calls the function 'GOGraph' in the "GOstats" library

_A_u_t_h_o_r(_s):

     Holger Froehlich

_E_x_a_m_p_l_e_s:

     ## Not run: 
      G=getGOGraph(c("GO:0006955","GO:0007584"))
      library(Rgraphviz)
      plot(G)
     ## End(Not run)

