Entry: BaumWelch
Aliases: BaumWelch BaumWelch.dthmm BaumWelch.mmglm BaumWelch.mmpp
Keywords: methods optimize
Description: Estimate Parameters Using Baum-Welch Algorithm
URL: ../../../library/HiddenMarkov/html/BaumWelch.html

Entry: Demonstration
Aliases: Demonstration
Keywords: documentation
Description: Demonstration Examples
URL: ../../../library/HiddenMarkov/html/Demonstration.html

Entry: Estep
Aliases: Estep
Keywords: optimize
Description: E Step of EM Algorithm
URL: ../../../library/HiddenMarkov/html/Estep.html

Entry: HiddenMarkov-internal
Aliases: residuals.mmpp as.dthmm as.mmglm makedensity makedensity1 makedistn getj dglm pglm
Keywords: internal
Description: Internally Used Functions
URL: ../../../library/HiddenMarkov/html/HiddenMarkov-internal.html

Entry: Mstep
Aliases: Mstep Mstep.beta Mstep.binom Mstep.exp Mstep.gamma Mstep.glm Mstep.lnorm Mstep.logis Mstep.norm Mstep.pois
Keywords: optimize
Description: M Step of EM Algorithm
URL: ../../../library/HiddenMarkov/html/Mstep.html

Entry: Overview
Aliases: Overview
Keywords: documentation
Description: Overview of Package
URL: ../../../library/HiddenMarkov/html/Overview.html

Entry: Viterbi
Aliases: Viterbi Viterbi.dthmm Viterbi.mmglm
Keywords: methods optimize
Description: Viterbi Algorithm for Hidden Markov Model Objects
URL: ../../../library/HiddenMarkov/html/Viterbi.html

Entry: bwcontrol
Aliases: bwcontrol
Keywords: optimize
Description: Control Parameters for the Baum Welch Algorithm
URL: ../../../library/HiddenMarkov/html/bwcontrol.html

Entry: changes
Aliases: changes
Keywords: documentation
Description: Changes Made to the Package
URL: ../../../library/HiddenMarkov/html/changes.html

Entry: compdelta
Aliases: compdelta
Keywords: distribution
Description: Compute Marginal Distribution of Stationary Markov Chain
URL: ../../../library/HiddenMarkov/html/compdelta.html

Entry: dthmm.obsolete
Aliases: dthmm.obsolete Baum.Welch residualshmm sim.hmm sim.hmm1 sim.markov Viterbihmm
Keywords: misc
Description: Discrete Time HMM - Obsolete Functions
URL: ../../../library/HiddenMarkov/html/dthmm-obsolete.html

Entry: dthmm
Aliases: dthmm
Keywords: classes
Description: Discrete Time HMM Object
URL: ../../../library/HiddenMarkov/html/dthmm.html

Entry: forwardback
Aliases: forwardback forward backward
Keywords: distribution
Description: Forward and Backward Probabilities
URL: ../../../library/HiddenMarkov/html/forwardback.html

Entry: logLik
Aliases: logLik logLik.dthmm logLik.mmglm logLik.mmpp
Keywords: methods
Description: Log Likelihood of Hidden Markov Model
URL: ../../../library/HiddenMarkov/html/logLik.html

Entry: mchain
Aliases: mchain
Keywords: classes
Description: Markov Chain Object
URL: ../../../library/HiddenMarkov/html/mchain.html

Entry: mmglm
Aliases: mmglm
Keywords: classes
Description: Markov Modulated GLM Object
URL: ../../../library/HiddenMarkov/html/mmglm.html

Entry: mmpp.obsolete
Aliases: mmpp.obsolete backward0.mmpp forward0.mmpp logLikmmpp Estep0.mmpp Baum.Welch.mmpp Baum.Welch0.mmpp sim.mmpp
Keywords: misc
Description: Markov Modulated Poisson Process - Obsolete Functions
URL: ../../../library/HiddenMarkov/html/mmpp-obsolete.html

Entry: mmpp
Aliases: mmpp
Keywords: classes
Description: Markov Modulated Poisson Process Object
URL: ../../../library/HiddenMarkov/html/mmpp.html

Entry: mmpp.misc
Aliases: forwardback.mmpp Estep.mmpp
Keywords: misc
Description: Markov Modulated Poisson Process - 2nd Level Functions
URL: ../../../library/HiddenMarkov/html/mmpp.misc.html

Entry: probhmm
Aliases: probhmm
Keywords: distribution
Description: Conditional Distribution Function
URL: ../../../library/HiddenMarkov/html/probhmm.html

Entry: residuals
Aliases: residuals residuals.dthmm residuals.mmglm
Keywords: methods
Description: Residuals of Hidden Markov Models
URL: ../../../library/HiddenMarkov/html/residuals.html

Entry: simulate
Aliases: simulate simulate.dthmm simulate.mchain simulate.mmglm simulate.mmpp
Keywords: methods datagen
Description: Simulate Various HMM Processes
URL: ../../../library/HiddenMarkov/html/simulate.html

Entry: summary
Aliases: summary summary.dthmm summary.mmpp summary.mmglm
Keywords: methods
Description: Summary Methods for Hidden Markov Model Objects
URL: ../../../library/HiddenMarkov/html/summary.html
