Entry: GarlandJanis.IC
Aliases: GarlandJanis.IC
Keywords: datasets
Description: Independet contrasts for Garland & Janis data set
URL: ../../../library/PHYLOGR/html/GarlandJanis.IC.html

Entry: GarlandJanis.Original
Aliases: GarlandJanis.Original
Keywords: datasets
Description: Garland & Janis's 1993 data on mammalian running speed and limb length
URL: ../../../library/PHYLOGR/html/GarlandJanis.Original.html

Entry: GarlandJanis.varcov
Aliases: GarlandJanis.varcov
Keywords: datasets
Description: Phylogenetic variance-covariance matrix for Garland & Janis (1993).
URL: ../../../library/PHYLOGR/html/GarlandJanis.varcov.html

Entry: Helper.functions
Aliases: num.sim.tips number.of.simulations number.of.tips.inp number.of.tips.pdi number.of.tips.sim scan.inp.file scan.pdi.file scan.simulation.file tips.names.inp tips.names.pdi
Keywords: misc
Description: Helper functions
URL: ../../../library/PHYLOGR/html/Helper.functions.html

Entry: Lacertid.IC
Aliases: Lacertid.IC
Keywords: datasets
Description: Independet contrasts for Bauwens and Diaz-Uriarte (1997) lacertid data set
URL: ../../../library/PHYLOGR/html/Lacertid.IC.html

Entry: Lacertid.Original
Aliases: Lacertid.Original
Keywords: datasets
Description: Bauwens and Diaz-Uriarte (1997) lacertid data
URL: ../../../library/PHYLOGR/html/Lacertid.Original.html

Entry: Lacertid.varcov
Aliases: Lacertid.varcov
Keywords: datasets
Description: Variance-covariance matrix for lacertids from Bauwens and Diaz-uriarte (1997)
URL: ../../../library/PHYLOGR/html/Lacertid.varcov.html

Entry: SimulExample
Aliases: SimulExample
Keywords: datasets
Description: A simulated data set
URL: ../../../library/PHYLOGR/html/SimulExample.html

Entry: cancor.phylog
Aliases: cancor.phylog
Keywords: multivariate
Description: Canonical Correlation Analysis from Simulated Data Sets
URL: ../../../library/PHYLOGR/html/cancor.phylog.html

Entry: cor.origin
Aliases: cor.origin
Keywords: models
Description: Correlation Through the Origin
URL: ../../../library/PHYLOGR/html/cor.origin.html

Entry: lm.phylog
Aliases: lm.phylog
Keywords: models
Description: Linear Models from Simulated Data Sets
URL: ../../../library/PHYLOGR/html/lm.phylog.html

Entry: matrix.D
Aliases: matrix.D
Keywords: array
Description: Produce the Matrix D of Garland and Ives (2000) for GLS
URL: ../../../library/PHYLOGR/html/matrix.D.html

Entry: phylog.gls.fit
Aliases: phylog.gls.fit
Keywords: models
Description: Phylogenetically-Based GLS Model Fitting
URL: ../../../library/PHYLOGR/html/phylog.gls.fit.html

Entry: plot.phylog.cancor
Aliases: plot.phylog.cancor
Keywords: methods
Description: Plot a phylog.cancor object
URL: ../../../library/PHYLOGR/html/plot.phylog.cancor.html

Entry: plot.phylog.lm
Aliases: plot.phylog.lm
Keywords: methods
Description: Plot a phylog.lm object
URL: ../../../library/PHYLOGR/html/plot.phylog.lm.html

Entry: plot.phylog.prcomp
Aliases: plot.phylog.prcomp
Keywords: methods
Description: Plot a phylog.prcomp object
URL: ../../../library/PHYLOGR/html/plot.phylog.prcomp.html

Entry: prcomp.phylog
Aliases: prcomp.phylog
Keywords: multivariate
Description: Principal Components Analysis from Simulated Data Sets
URL: ../../../library/PHYLOGR/html/prcomp.phylog.html

Entry: print.summary.phylog
Aliases: print.summary.phylog.lm print.summary.phylog.cancor print.summary.phylog.prcomp
Keywords: methods
Description: Printing summaries of PHYLOGR statistical functions
URL: ../../../library/PHYLOGR/html/print.summary.phylog.html

Entry: read.inp.data
Aliases: read.inp.data
Keywords: manip file
Description: Read Inp Data Files
URL: ../../../library/PHYLOGR/html/read.inp.data.html

Entry: read.pdi.data
Aliases: read.pdi.data
Keywords: manip file
Description: Read Pdi Data Files
URL: ../../../library/PHYLOGR/html/read.pdi.data.html

Entry: read.phylip.data
Aliases: read.phylip.data
Keywords: manip file
Description: Read Phylip Infile Data Files
URL: ../../../library/PHYLOGR/html/read.phylip.data.html

Entry: read.phylog.matrix
Aliases: read.phylog.matrix
Keywords: manip
Description: Read a Phylogenetic Covariance Matrix
URL: ../../../library/PHYLOGR/html/read.phylog.matrix.html

Entry: read.sim.data
Aliases: read.sim.data
Keywords: manip file
Description: Read Sim Files From PDSIMUL
URL: ../../../library/PHYLOGR/html/read.sim.data.html

Entry: summary.phylog.cancor
Aliases: summary.phylog.cancor
Keywords: multivariate methods
Description: Summarize a phylog.cancor object
URL: ../../../library/PHYLOGR/html/summary.phylog.cancor.html

Entry: summary.phylog.lm
Aliases: summary.phylog.lm
Keywords: methods
Description: Summarize a phylog.lm object
URL: ../../../library/PHYLOGR/html/summary.phylog.lm.html

Entry: summary.phylog.prcomp
Aliases: summary.phylog.prcomp
Keywords: multivariate methods
Description: Summarize a phylog.prcomp object
URL: ../../../library/PHYLOGR/html/summary.phylog.prcomp.html
