Entry: BOOTSimpson
Aliases: BOOTSimpsonD BOOTSimpsonR
Keywords: htest
Description: Simultaneous confidence intervals for Simpson indices
URL: ../../../library/BSagri/html/BOOTSimpson.html

Entry: Brachycera
Aliases: Brachycera
Keywords: datasets
Description: Eklektor counts of Brachycera
URL: ../../../library/BSagri/html/Brachycera.html

Entry: CCDiff
Aliases: CCDiff
Keywords: misc
Description: Contrasts of parameters simulated in BUGS
URL: ../../../library/BSagri/html/CCDiff.html

Entry: CCDiff.boot
Aliases: CCDiff.boot
Keywords: htest
Description: Compute contrasts of chains of joint empirical distributions.
URL: ../../../library/BSagri/html/CCDiff.boot.html

Entry: CCDiff.default
Aliases: CCDiff.default
Keywords: htest
Description: Compute contrasts of chains of joint empirical distributions.
URL: ../../../library/BSagri/html/CCDiff.default.html

Entry: CCRatio
Aliases: CCRatio
Keywords: misc
Description: Ratio - contrasts of parameters simulated in BUGS
URL: ../../../library/BSagri/html/CCRatio.html

Entry: CCRatio.boot
Aliases: CCRatio.boot
Keywords: htest
Description: Compute ratio contrasts of chains of joint empirical distributions.
URL: ../../../library/BSagri/html/CCRatio.boot.html

Entry: CCRatio.default
Aliases: CCRatio.default
Keywords: htest
Description: Compute ratio contrasts of chains of joint empirical distributions.
URL: ../../../library/BSagri/html/CCRatio.default.html

Entry: CIGLM
Aliases: CIGLM
Keywords: htest
Description: Wrapper to compute confidence intervals from glms
URL: ../../../library/BSagri/html/CIGLM.html

Entry: CInp
Aliases: CInp CInp.default CInp.CCRatio CInp.CCDiff CInp.bugs
Keywords: htest
Description: Construct local confidence intervals from joint empirical distribution.
URL: ../../../library/BSagri/html/CInp.html

Entry: Cica1
Aliases: Cica1
Keywords: datasets
Description: Catches of Planthoppers and Leafhoppers
URL: ../../../library/BSagri/html/Cica1.html

Entry: Cica2
Aliases: Cica2
Keywords: datasets
Description: Catches of Planthoppers and Leafhoppers
URL: ../../../library/BSagri/html/Cica2.html

Entry: CountRep
Aliases: CountRep
Keywords: datasets
Description: Synthetic repeated count data set
URL: ../../../library/BSagri/html/CountRep.html

Entry: Decomp
Aliases: Decomp
Keywords: datasets
Description: A simulated data set
URL: ../../../library/BSagri/html/Decomp.html

Entry: Diptera
Aliases: Diptera
Keywords: datasets
Description: Soil eklektor data for some families of Diptera
URL: ../../../library/BSagri/html/Diptera.html

Entry: ExNBCov
Aliases: ExNBCov
Keywords: datasets
Description: Simulated example data, drawn from a Negative Binomial Distribution
URL: ../../../library/BSagri/html/ExNBCov.html

Entry: ExPCov
Aliases: ExPCov
Keywords: datasets
Description: Simulated example data following a Poisson distribution
URL: ../../../library/BSagri/html/ExPCov.html

Entry: Feeding
Aliases: Feeding
Keywords: datasets
Description: Pupation and Hatching rate in a feeding experiment with four varieties
URL: ../../../library/BSagri/html/Feeding.html

Entry: IAcontrasts
Aliases: IAcontrasts
Keywords: htest
Description: Interaction contrasts for 2-factorial designs
URL: ../../../library/BSagri/html/IAcontrasts.html

Entry: IAcontrastsCMAT
Aliases: IAcontrastsCMAT
Keywords: htest
Description: Interaction contrasts for a two-factorial design
URL: ../../../library/BSagri/html/IAcontrastsCMAT.html

Entry: Lepi
Aliases: Lepi
Keywords: datasets
Description: Insect counts of 12 Species
URL: ../../../library/BSagri/html/Lepi.html

Entry: MM1
Aliases: MM1
Keywords: datasets
Description: Simulated data set for a simple mixed model
URL: ../../../library/BSagri/html/MM1.html

Entry: MMPois
Aliases: MMPois
Keywords: datasets
Description: Simulated data for a simple mixed model with Poisson response
URL: ../../../library/BSagri/html/MMPois.html

Entry: MMPoisRep
Aliases: MMPoisRep
Keywords: datasets
Description: Simulated data for a simple mixed model with Poisson response
URL: ../../../library/BSagri/html/MMPoisRep.html

Entry: Nematocera
Aliases: Nematocera
Keywords: datasets
Description: Eklektor counts of Nematocera
URL: ../../../library/BSagri/html/Nematocera.html

Entry: R2Bugsdat1w
Aliases: R2Bugsdat1w
Keywords: misc
Description: For internal use
URL: ../../../library/BSagri/html/R2Bugsdat1w.html

Entry: R2Bugsdat1w.data.frame
Aliases: R2Bugsdat1w.data.frame
Keywords: misc
Description: For internal use.
URL: ../../../library/BSagri/html/R2Bugsdat1w.data.frame.html

Entry: SCSnp
Aliases: SCSnp SCSnp.default SCSnp.CCDiff SCSnp.CCRatio SCSnp.bugs
Keywords: htest
Description: Simultaneous confidence sets from empirical joint distribution.
URL: ../../../library/BSagri/html/SCSnp.html

Entry: UnlogCI
Aliases: UnlogCI UnlogCI.glht
Keywords: htest
Description: Transform confidence intervals from glm fits and geeglm fits.
URL: ../../../library/BSagri/html/UnlogCI.html

Entry: allignment
Aliases: allignment
Keywords: misc
Description: Allignment according to one factor
URL: ../../../library/BSagri/html/allignment.html

Entry: c2compnames
Aliases: c2compnames
Keywords: htest
Description: Define row names of a contrast matrix, depending on its column names
URL: ../../../library/BSagri/html/c2compnames.html

Entry: checkargssim
Aliases: checkargssim
Keywords: misc
Description: For internal use.
URL: ../../../library/BSagri/html/checkargssim.html

Entry: fakeln
Aliases: fakeln
Keywords: datasets
Description: A simulated data set of lognormal data
URL: ../../../library/BSagri/html/fakeln.html

Entry: minus2slash
Aliases: minus2slash
Keywords: misc
Description: Replace - by / in character strings
URL: ../../../library/BSagri/html/minus2slash.html

Entry: modelparm.methods
Aliases: modelparm.gamlss modelparm.geeglm
Keywords: htest
Description: For internal use. Extract model parameters needed for multcomp from objects of class gamlss or geeglm.
URL: ../../../library/BSagri/html/modelparm.methods.html

Entry: plotCI.Methods
Aliases: plotCI.pairwiseCI plotCI.UnlogCI plotCI.simplesimint
Keywords: hplot
Description: Plot confidence intervals calculated by pairwiseCI
URL: ../../../library/BSagri/html/plotCI.Methods.html

Entry: print.CInp
Aliases: print.CInp
Keywords: print
Description: Print function for CInp
URL: ../../../library/BSagri/html/print.CInp.html

Entry: print.SCSnp
Aliases: print.SCSnp
Keywords: print
Description: Print function for SCSnp
URL: ../../../library/BSagri/html/print.SCSnp.html

Entry: print.UnlogCI
Aliases: print.UnlogCI
Keywords: print
Description: Print function for UnlogCI
URL: ../../../library/BSagri/html/print.UnlogCI.html

Entry: print.simplesimint
Aliases: print.simplesimint
Keywords: print
Description: Print objects of class "simplesimint"
URL: ../../../library/BSagri/html/print.simplesimint.html

Entry: simplesimint
Aliases: simplesimint
Keywords: htest
Description: Simultaneous confidence intervals from raw estimates
URL: ../../../library/BSagri/html/simplesimint.html

Entry: summary.simplesimint
Aliases: summary.simplesimint
Keywords: print
Description: Detailed print out for simplesimint objects
URL: ../../../library/BSagri/html/summary.simplesimint.html

Entry: vcov.gamlss
Aliases: vcov.gamlss
Keywords: htest
Description: Extract variance covariance matrix from objects of class gamlss
URL: ../../../library/BSagri/html/vcov.gamlss.html

Entry: vcov.geeglm
Aliases: vcov.geeglm
Keywords: htest
Description: Extract variance covariance matrix from objects of class geeglm
URL: ../../../library/BSagri/html/vcov.geeglm.html
