plotMC {PBSadmb} | R Documentation

## Plot Results of MCMC Simulation

### Description

Plot results of an ADMB MCMC simulation using various plot methods.

### Usage

    plotMC(prefix, act="pairs", pthin=1, useCols=NULL)

### Arguments

`prefix` | string name prefix of the ADMB project (e.g., `"vonb"`).
`act` | string scalar: action describing plot type (current choices: `"pairs"`, `"eggs"`, `"acf"`, `"trace"`, and `"dens"`).
`pthin` | numeric scalar indicating interval at which to collect records from the `.mc.dat` file for plotting.
`useCols` | logical vector indicating which columns of `.mc.dat` to plot.

### Note

A wrapper function that can be called from a GUI exists as `.win.plotMC`. Use the PBSadmb GUI to explore these plots easily.

### Author(s)

Rowan Haigh, Pacific Biological Station, Nanaimo BC, Canada

### See Also

`runMC`, `showADargs`

[Package PBSadmb version 0.61.44 Index]