R: Convert TPL Code to CPP Code

convAD {PBSadmb}

R Documentation

Convert TPL Code to CPP Code

Description

Convert code in 'prefix'.tpl to C++ code in 'prefix'.cpp.

Usage

convAD(prefix, raneff=FALSE, logfile=TRUE, add=FALSE, 
       verbose=TRUE, comp="GCC")

Arguments

`prefix`	string name prefix of the ADMB project (e.g., `"vonb"`).
`raneff`	logical: if `TRUE`, use the random effects model executable `tpl2rem.exe`, otherwise use the normal model executable `tpl2cpp.exe`.
`logfile`	logical: if `TRUE`, create a log file of the messages from the shell call.
`add`	logical: if `TRUE`, append shell call messages to an exsiting log file.
`verbose`	logical: if `TRUE`, report the shell call an its messages to the R console.
`comp`	string: compiler to use - "GCC" is only currently supported

Details

This function invokes the ADMB command tpl2cpp.exe or tpl2rem.exe, if raneff is FALSE or TRUE respectively. If logfile=TRUE, any errors will appear in 'prefix'.log. If verbose=TRUE, they will appear in R console.

Value

Invisibly returns the shell call and its messages.

Note

A wrapper function that can be called from a GUI exists as .win.convAD.

Author(s)

Jon T. Schnute, Pacific Biological Station, Nanaimo BC, Canada