filterByDefault           package:anapuce           R Documentation

_F_i_l_t_e_r _a_p_p_l_i_e_d _o_n _d_a_t_a _b_e_f_o_r_e _n_o_r_m_a_l_i_s_a_t_i_o_n

_D_e_s_c_r_i_p_t_i_o_n:

     Apply a filter on input data by deleting spots with values for
     filter.var are mentionned in _filter.fic_ by deleting spots with
     flags equal to _flag0_ (-100 by default).

_U_s_a_g_e:

     filterByDefault(fileIN, flag0, m, filter.fic = filter.fic, filter.var = filter.var, sep = sep, sep.write = sep.write, dec.write = dec.write, ...)

_A_r_g_u_m_e_n_t_s:

fileIN      : input datafame. 

flag0       : value(s) of flags to delete. 

m           : number of identificant columns. 

filter.fic  : name of the file containing the values of the variable
          named filter.var to delete. 

filter.var  : name of the variable concerned with deletion. 

sep         : the field separator string to use in the read.table
          function. 

sep.write   : the field separator string to use in the write.table
          function. 

dec.write   : the string to use for decimal points in the write.table
          function. 

...       : Further arguments to be passed to read.table. 

_V_a_l_u_e:

     A subset of the input dataframe

_A_u_t_h_o_r(_s):

     J. Aubert

_S_e_e _A_l_s_o:

     'normalisation'

