UnitTypesFile           package:aroma.core           R Documentation

_T_h_e _U_n_i_t_T_y_p_e_s_F_i_l_e _i_n_t_e_r_f_a_c_e _c_l_a_s_s

_D_e_s_c_r_i_p_t_i_o_n:

     Package:  aroma.core 
      *Class UnitTypesFile*

     'Interface'
      '~~|'
      '~~+--''UnitAnnotationDataFile'
      '~~~~~~~|'
      '~~~~~~~+--'_'UnitTypesFile'_

     *Directly known subclasses:*
      AromaUnitTypesFile

     public abstract static class *UnitTypesFile*
      extends UnitAnnotationDataFile

     A UnitTypesFile provides methods for querying the unit types of a
     given chip type, e.g. genotyping or copy-number unit, exon unit
     etc.

_U_s_a_g_e:

     UnitTypesFile(...)

_A_r_g_u_m_e_n_t_s:

     ...: Arguments passed to 'UnitAnnotationDataFile'.

_M_e_t_h_o_d_s:

     *Methods:*

         'getUnitTypes'  -
         'nbrOfUnits'    -

     *Methods inherited from UnitAnnotationDataFile*:
      byChipType, getAromaUflFile, getAromaUgpFile, getChipType,
     getPlatform, nbrOfUnits

     *Methods inherited from Interface*:
      extend, print, uses

_T_h_e _a_r_o_m_a _u_n_i_t-_t_y_p_e _m_a_p:

     unknown=0, expression=1, genotyping=2, resequencing=3, tag=4,
     copynumber=5, genotypingcontrol=6, expressioncontrol=7

_A_u_t_h_o_r(_s):

     Henrik Bengtsson (<URL: http://www.braju.com/R/>)

