renin               package:haplo.ccs               R Documentation

_E_x_a_m_p_l_e _D_a_t_a_s_e_t _f_o_r '_h_a_p_l_o._c_c_s'

_D_e_s_c_r_i_p_t_i_o_n:

     This dataset serves as the example dataset for 'haplo.ccs'. The
     genotypes in this dataset were generated from haplotype frequency
     data for renin, one of the genes in the renin-angiotensin system.

_U_s_a_g_e:

     data(renin)

_F_o_r_m_a_t:

     All variables are in numeric format.

_D_e_t_a_i_l_s:

     'case': case-control status (1=Case, 0=Control)

     'geno': a matrix of alleles indicating genotype where each locus
     has a pair of adjacent columns of alleles, and the order of
     columns corresponds to the order of the loci on the chromosome
     (1=A, 2=C, 3=T, 4=G)

     'gender': gender (1=Male, 2=Female)

     'age': age in years

     'race': race (1=White, 2=Black, 3=Asian, 4=Other)

_N_o_t_e:

     Other covariates, such as gender, age, and race were randomly
     generated. Therefore no scientific inference should be made from
     these data.

_A_u_t_h_o_r(_s):

     Benjamin French and Thomas Lumley, University of Washington

_R_e_f_e_r_e_n_c_e_s:

     French B, Lumley T, Monks SA, Rice KM, Hindorff LA, Reiner AP,
     Psaty BM. Simple estimates of haplotype relative risks in
     case-control data. Genetic Epidemiology 2006; 30(6):485-494.

_S_e_e _A_l_s_o:

     'haplo.ccs'

_E_x_a_m_p_l_e_s:

     data(renin)

